Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01246 ATGAAGATGATTTGCATTTTTATTTTTATTTTTTATCTTCTCTCATATACCTCCCATGCTGTATCTACCAATGATTTCTGTGTAGCCGACTTTATGTTTCCAAATACTCCTTCAGGTTATCCATGTATGTCAGAAACAAATGTAACTGCAGATCATTTTGCATCCTCTACTCTTGTAGCTGGGGACACAAATAACTTTTTTAATCTTGGATTCACCACTGCATTTCTCAAGGATATACCAGGTCTCAACGGACTCGGCATCTCTGCAGGAAGAATAGATTTTGATATAAATGGAACGCTTCCAATGCATATTCATCCTGATGCATCTGAATTAATAATCGTTGCTCAAGGACTATTGCATTATCAAGTTAATACTGCTCCTACAAAAGCTATTGTTTATGCTGTTTATGGTAGCGAAAATCCTAGCATCCAATTTCTCGTTACTTTATTATTTAGAAATAATTTACCAACTCCAATAATTGAAAAGACTACTCTCCTTGATGCTTCACAAATTAAGAAGCTTAAGGCTCAGCTTGGTGGCAGTGGCTAG 549 0.3588 MKMICIFIFIFYLLSYTSHAVSTNDFCVADFMFPNTPSGYPCMSETNVTADHFASSTLVAGDTNNFFNLGFTTAFLKDIPGLNGLGISAGRIDFDINGTLPMHIHPDASELIIVAQGLLHYQVNTAPTKAIVYAVYGSENPSIQFLVTLLFRNNLPTPIIEKTTLLDASQIKKLKAQLGGSG 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01246 182 ProSitePatterns Germin family signature. 98 111 IPR019780 GO:0030145
Vifa4g01246 182 SMART Cupin_1_3 56 172 IPR006045 -
Vifa4g01246 182 SUPERFAMILY RmlC-like cupins 24 176 IPR011051 -
Vifa4g01246 182 Gene3D Jelly Rolls 115 182 IPR014710 -
Vifa4g01246 182 Gene3D Jelly Rolls 20 114 IPR014710 -
Vifa4g01246 182 Pfam Cupin 71 117 IPR006045 -
Vifa4g01246 182 CDD cupin_OxOx 23 178 IPR001929 GO:0030145
Vifa4g01246 182 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 15 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01246 Vifa-Chr4 375572753 375573385 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01246 1 181 Miscellaneous Gene Families AT5G20630 38.389 3.05e-43 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01246 - - mtr:25500551 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01246 4 375572753 375573385 Vifa4g01246 4 375572753 375573385 ECH