Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01219 ATGCTAATTTTTGCCATTTTCAACTTTCTCCAACATCACGTTAATTCATCATTCAGGGAGAGGTTGTTCATGGCAACTGCAACCATGGCTACTGCAGCAGGTGCAGCTGCTCTTTTATACTATACGTTGAATAAGAAATTGCAGTCTCAAAGCACAATGGATGATGATGAGGACAGTGGTAGTGATGTGCCGACGGATGGACGGTTTCGTGTTACTCATAGGTTAATTGAAGCGCCTGCTACATGGTTGGAAACAATTTCGACGTTGTCAGAAACACTCAGGTTTACGTATTCGGAGACACTTGGAAAATGGCCTATTGGGGATTTGGCATTTGGTATCAGCTTTCTTCTCAAGAGACAGGGGAACTATCTTGTTGACAGCGTATTTGGTGGTACGGACAGTGTACAGCTGAAAGGGCCTGAAATTACTGCTGAACTTAAGCATCTCTTAAACTTGCTGACTCTGTGTTGGCATTTTTCAAAGAAGTCATTTCCCTCATTTCTAGAAGAAACTGGTTACACTGATGAGAATGTCCTTCTTCGAGAAGCAAAAGCCGGAATTTTGAAACCAGCTTTTACAATCATAGTTGATCACAAGATGAGGCGTCTTTTATTGTTGATTCGTGGCACACATAGTATCAAGGATACTCTAACAGCTGTTACAGGAACTGTGGTACCATTTCATCACACTGTAGTTCATCAGGGGGGAGTAACTGATTTGGTTTTAGGATATGCACATTGTGGAATGGTTGCTGCTGCACGTTGGATTGCAAAGCTTGCAACTCCTTGTCTCCTTGATGCACTTGGCCAATACCCAGACTATGAAGTTAAGATTGTAGGACACTCTTTGGGTGGAGGCACAGCAGCAATTTTAACATATGTTTTAAGAGAGCAAAAGGAACTGTCTGTGGCTACATGTGTTACATTTGCTCCAGCTGCTTGTATGACATGGGAATTGGCAGAGTCAGGCACTAGTTTTATTACTTCTATTATCAATGGAGCTGATTTGGTACCTACATTCTCAGCTGCATCTGTAGACGACTTGCGTACCGAGGTGACAGCATCAGCATGGATAAATGACTTAAGGAATCAAATCGAGCAAACAAGAATACTCAGTACTGTATATCGGTCTGCCTCTGCACTAGGTTCTCGCCTCCCATCTATTGCCAGTGCAAGAGCAAAAGTTGCTGGCGCTGGGGCTATGTTGCAGCCAGTTTCTAATGGAACACAGGTTGTGATGAAAAGGGCCAAGAGTATGGCTCAGGCAGCATGGACACGTCCAAACCTAAACCTGACCTCTTGGTCATGCATGGGACCCCGTCGCAGAGCCACAGCTGCTCATTCACAATCCAAAGAAGAAGGTTCCCCTACATCTTCAGGCTCTGACAATGCAGAATGTTCTGATCCACTTTGTTCGCCCAAGAAGGGGATAAATGCCAAGAGCATGAACCTTCCTGTATCTTCATCTGTGGAAGAGTGGTCAACTGAAATTGAATGTGTAAATGAAAGCAATGCAGACGACGAGCTGGATGACGATCTCCATCTCAATGAGAACATGATGGACCATCACAGATATCAGGATCAGATGAGTGAAGTGGAGTTGTGGCAACAACTAGAGCATGAGCTATATGACAGACCTGAAGGCGAGGAGGCTGAAGTGGCTAAGGAGATAAGGGAAGAAGAGGAAGCTGCCATAACCGAGGTAGTAGGGCAAACACACAACAGATCTGCACCAGAAATGAAAGAAATTCACAGATTTTTCCCTCCAGGAAAGATAATGCACATTGTTACGCTCCACTCCGATTCTACCGAGCTTGAGAGTGATGGCAGCCCAACCTCTTCTACAAGTTCAGACGACAGCCAGCTAATTGATACAAAGATTGGAATTTTCCTAACTTCAAGGTCTCTATATAGTAAACTCAGACTTTCACAGACCATGATCAGTGATCACTTCATGCCAATATATAGAAAGCAGATTGAAAAGCTAATTAAAGAACTTGAGGAAGAATCTATTGAGGGTCATATTACACAAGAAGTAATGTTATAG 2046 0.4355 MLIFAIFNFLQHHVNSSFRERLFMATATMATAAGAAALLYYTLNKKLQSQSTMDDDEDSGSDVPTDGRFRVTHRLIEAPATWLETISTLSETLRFTYSETLGKWPIGDLAFGISFLLKRQGNYLVDSVFGGTDSVQLKGPEITAELKHLLNLLTLCWHFSKKSFPSFLEETGYTDENVLLREAKAGILKPAFTIIVDHKMRRLLLLIRGTHSIKDTLTAVTGTVVPFHHTVVHQGGVTDLVLGYAHCGMVAAARWIAKLATPCLLDALGQYPDYEVKIVGHSLGGGTAAILTYVLREQKELSVATCVTFAPAACMTWELAESGTSFITSIINGADLVPTFSAASVDDLRTEVTASAWINDLRNQIEQTRILSTVYRSASALGSRLPSIASARAKVAGAGAMLQPVSNGTQVVMKRAKSMAQAAWTRPNLNLTSWSCMGPRRRATAAHSQSKEEGSPTSSGSDNAECSDPLCSPKKGINAKSMNLPVSSSVEEWSTEIECVNESNADDELDDDLHLNENMMDHHRYQDQMSEVELWQQLEHELYDRPEGEEAEVAKEIREEEEAAITEVVGQTHNRSAPEMKEIHRFFPPGKIMHIVTLHSDSTELESDGSPTSSTSSDDSQLIDTKIGIFLTSRSLYSKLRLSQTMISDHFMPIYRKQIEKLIKELEEESIEGHITQEVML 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01219 681 Coils Coil 652 672 - -
Vifa4g01219 681 Gene3D alpha/beta hydrolase 157 378 IPR029058 -
Vifa4g01219 681 MobiDBLite consensus disorder prediction 440 483 - -
Vifa4g01219 681 Pfam Lipase 3 N-terminal region 70 149 IPR005592 GO:0016042
Vifa4g01219 681 SUPERFAMILY alpha/beta-Hydrolases 171 342 IPR029058 -
Vifa4g01219 681 Pfam Lipase (class 3) 205 342 IPR002921 GO:0006629
Vifa4g01219 681 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 29 669 - -
Vifa4g01219 681 CDD Lipase_3 196 341 - -
Vifa4g01219 681 MobiDBLite consensus disorder prediction 449 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01219 Vifa-Chr4 367835438 367841299 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01219 38 674 Acyl Lipid Metabolism Gene Families AT3G14075 62.712 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01219 - - gsj:114390808 974.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01219 4 367835438 367841299 Vifa4g01219 4 367835438 367841299 ECH