Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01216 ATGGGCGGAACCGTGGGTTGTGTCTGGCAGCGAGAATTGAGAAGCAGGAACTTCAACGTCTCTCTTGTGGTAGTCTGCAGACAAAGAGACTTGTCAAAGTGTGCAGATCTAGAATTCGTCGGAGTTCGCGACTACGATGGTAGCGCGATTAGTCTCACGTTGGTTGAAGCAAGTCACTGTCGTGCGAGTTCTTGCAGTTTGATTCTTCAAATGAGATCTTCTTTTGTTGGATTCATCAGAATACTTGTCCTTGTTTTTCTCTCAGTTTGCTGCTTTTCTACGGATGGAAGTACTAAAGCGCAGAGAACTTTAGCGATCATAAAGCCGGACGGATTGTTTGGTAACTACACAGATGATATCAAGAGAACAATTTCAGAATATGGTTTCAACATTGTCAAGGAAAAGATTGTTCAACTTGATGAGGCGACTGTGAAAAGATTTTATGCAGAGCACTCTTCGAAAAGCTTCTTTTCCAGCCTAGTTAAATACATGACAAGTGGACCAGTATTAATCATGGTTTTGGAGAAGGATAATGCTATTGCTGATTGGCGTGCTTTAATGGGTCCAACTGATGCAAGCAAGGCCAAGATTACTCACCCTCACAGTATTAGAGCAAAATGTGGATTGGATACTGAAAAAAATTGTGTTCATGGTTCAGACTCTACCAAGTCTGCACAAAGAGAGATACTGTTTTTCTTCGACGAGCTCGCTCCAGATGTAATTGCAGAACACGATGAATTGTAG 744 0.4207 MGGTVGCVWQRELRSRNFNVSLVVVCRQRDLSKCADLEFVGVRDYDGSAISLTLVEASHCRASSCSLILQMRSSFVGFIRILVLVFLSVCCFSTDGSTKAQRTLAIIKPDGLFGNYTDDIKRTISEYGFNIVKEKIVQLDEATVKRFYAEHSSKSFFSSLVKYMTSGPVLIMVLEKDNAIADWRALMGPTDASKAKITHPHSIRAKCGLDTEKNCVHGSDSTKSAQREILFFFDELAPDVIAEHDEL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01216 247 PRINTS Nucleoside diphosphate kinase signature 214 233 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Vifa4g01216 247 PRINTS Nucleoside diphosphate kinase signature 103 125 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Vifa4g01216 247 PRINTS Nucleoside diphosphate kinase signature 167 184 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Vifa4g01216 247 PRINTS Nucleoside diphosphate kinase signature 147 166 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Vifa4g01216 247 Gene3D - 95 244 IPR036850 -
Vifa4g01216 247 SMART ndk_5 100 239 IPR034907 -
Vifa4g01216 247 SUPERFAMILY Nucleoside diphosphate kinase, NDK 100 236 IPR036850 -
Vifa4g01216 247 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 76 242 - -
Vifa4g01216 247 Pfam Nucleoside diphosphate kinase 101 235 IPR034907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01216 Vifa-Chr4 367375691 367383303 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01216 K20790 - psat:127126487 304.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01216 4 367375691 367383303 Vifa4g01216 4 367375691 367383303 ECH