Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01189 ATGAGTCTGTTTGACATGGATTTGAGTGGTGTAGTGAACAATCTGTTCAATCATATTCATGAAACTCCTAGGATTCATGAGAATCATGAGAGCAGAAAAACTTCCACTAGTATCCCAGTTGACATTTTGGATACTCCTAAGGAGTATATATTCTTCATGGATTTTCCTGGTCTCTCCAAATCTGAAATTCAGGTGACAGTTGAAGAAGAGAACACACTCGTAATAAAGAGCAACGGGAAAAGGAAACGTGAAGATGGTGAAGAAGAAGGCTGCAAGTACCTTAGGCTAGAGAGAAGAGCACCTCAGAAAATGGTGAGGAAGTTTCGTTTGCCAGAGAATGCAAATGTGTCAGCTATAACAGCTAAATGTGAGAATGGAGTTCTAACTGTGGTCGTAGAGAAGCAAACTCCACCTCCAAAATCAAAAACAGTTGAAGTTGCCATTGCCTAA 450 0.4022 MSLFDMDLSGVVNNLFNHIHETPRIHENHESRKTSTSIPVDILDTPKEYIFFMDFPGLSKSEIQVTVEEENTLVIKSNGKRKREDGEEEGCKYLRLERRAPQKMVRKFRLPENANVSAITAKCENGVLTVVVEKQTPPPKSKTVEVAIA 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01189 149 Gene3D - 3 148 IPR008978 -
Vifa4g01189 149 SUPERFAMILY HSP20-like chaperones 33 142 IPR008978 -
Vifa4g01189 149 Pfam Hsp20/alpha crystallin family 41 146 IPR002068 -
Vifa4g01189 149 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 28 146 IPR031107 -
Vifa4g01189 149 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 31 149 IPR002068 -
Vifa4g01189 149 FunFam 17.4 kDa class III heat shock protein isoform A 4 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01189 Vifa-Chr4 358066181 358066721 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01189 K13993 - gmx:100803161 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01189 4 358066181 358066721 Vifa4g01189 4 358066181 358066721 ECH