Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01187 ATGGAGAAAAGTGTTGGTGTTGTTGATGGAGTTGACTCCAAGTCTTGCTACATGCAGAAGTTTAGGCTCTATGAAACTCGTTCGAGATTTTACATGATCGGAAGAGACAAAAGCAGAACATTTTGGAGGGTCTTAAAGATCGATAGATTGGAGCCATCCGAGTTAAATATCGTCGAAGATCCTACATTATACTCAGAAGCCGAGTGTTGTGACATTTTGAAGCGTATTCATGACGGAAACAAGTCCACCGGAGGGCTTAAATTTGTTACAACTTGCTATGGAATCATCGGATTTATCAAATTTCTCGAGCCATACTACATGTTGCTTATAACGAAAAGGAAGAAGATTGGCACGATATGCGGACATGCTGTATATGCTATCACAAAGAGCGAAATGGTTCTGATTCCACATCCAAGTGTGCGATCGAAATTGGCATATTCTAAGGATGAGAACAGATACAAGAAGCTTCTATGCAGTATGGATCTTACGAAGGACTTCTTTTACAGCTACTCGTACAACATCATGCTAAGTCTTCAAAAGAACTTATCTGGCCATAATGTTATCGGACAATCACTTTATGAAACACTTTTTGTTTGGAACGAGTTCTTAACTCGTGGAATCAGGAATACTCTCCAGAATACTTCCTGGACTGTTGCTTTAGTCTATGGCTTTTTTAAACAGGTTAACCTTTCTATATCTGGCCGTGAGTTCAACATGATAATCATCGCTAGGCGCTCAAGGCACTATGCTGGTACCAGATATTTGAAACGAGGAGTCAACAAACGGGGTAGAGTAGCGAATGATGTTGAAACTGAGCAGATAGTCTTTGCAGACGCTAGTGATGGATCCCCGATGCAAATCAGTTCCGTGGTGCAACTACGGGGTTCGATCCCTCTCTTCTGGTCTCAAGAAGCCTCGCCATTGAACATGAAACCTGATATTATATTATCACACAAGGATGCGATGTTTGAAGCCACAAAACTTCATTTTGACAATCTTGTCACCCGATACGGAAATCCAATAATTATACTGAACTTGATTAAGACTCGTGAGAAAAGGCCCCGTGAAACTATTCTGCGAACCGAGTTCGCTAATGCTGTTAAGTCTATTAATCAAAATTTGAGCAAGGATGAACGCCTGAGGTTTCTTCATTGGGATTTGCATCGACACTCAAGACGCAGCAAGGCCACCAATGTGCTGTTGCAACTGGGAAAAGTGGCTGCGTTTGCGTTGAAGCTAACTGGCATCTTCTACTGTCCAGTAACGCCAAACATGAAGCTAGAGGGATTATTCCCGTATTCCTTCTCCGAAAATAACCATGTCATTGATGAATCCGTTGCGGTACAAGATAGTATAAGCAACGATGAGAACAAAGATTACAATGTCAAACCAAAGACACTTCAATCAGGCGTGTTGAGGACAAATTGCATTGATTGTTTAGACCGCACCAATGTTGCGCAATATGCTTATGGACTAGTTGCACTTGGAAGTCAGTTACAAGCATTAGGATTTACGGAAGACCCACATATTGATCTTGACAACCCTTTGGCAAAGGAAGTAATGACAGCTTATGAGTCCATGGGAGACACATTAGCCTTTCAATATGGCGGTTCTGCAGCGCACAACAAAATATTTTCTGAAAGAAGAGGTCAATGGAAAGCAGCAGCACAATCCCAAGAACTTATTCGAACCATACAGCGTTATTACAACAATACCTATTTGGATGGTGCTAAACAAAAAGCAATTAACATATTCTTGGGGCATTTTCAGCCACAGCAGGGAAAACCATTACTTTGGGAGCTTGATTCAGATCAACATTACAATGTTGGAAGTTATGGCCCGAATCTAGCCGATGGAATCGACGGGTCATTTATTAGAAGATCACAATCCGATGGCAACATTATTGACGAAAGCGATGCTACAATTAGGAATTTACATGCTCCAGACTGTCAACACTCATCTAAAAATCCCGATAAACGATCTCTTTTGAAGTCTGCCTCCGACACATTCACTTGTGAAAGTTCTATTTGCAATTGCAGGCAAATTTATGGAGGAATGGGAAAAGACCAATATAGTGAAAGCGATCACATTTGTTATGCGGAACATGGAGATGCATGTGATTGCTCCAATTTCCTTGATGTGGACTCGCTTTCTTCTGGAAATTCTTGTGAAGAGGAACTACTTGAAAGGTCAATCAGCATCACCTCAGACCATATTGTGAATGAACAAATAACTGAGGTTCCTGCAAGTGAATCTGGACCTATCTTGAAGGAGAAGCAAAGTGAAGAAAAACTGAACAAAAGTGGAAAACATACTGATAGCTTTGAAAAGTGGGTGACTCATGGTGAGATACTATATATTTGA 2364 0.4099 MEKSVGVVDGVDSKSCYMQKFRLYETRSRFYMIGRDKSRTFWRVLKIDRLEPSELNIVEDPTLYSEAECCDILKRIHDGNKSTGGLKFVTTCYGIIGFIKFLEPYYMLLITKRKKIGTICGHAVYAITKSEMVLIPHPSVRSKLAYSKDENRYKKLLCSMDLTKDFFYSYSYNIMLSLQKNLSGHNVIGQSLYETLFVWNEFLTRGIRNTLQNTSWTVALVYGFFKQVNLSISGREFNMIIIARRSRHYAGTRYLKRGVNKRGRVANDVETEQIVFADASDGSPMQISSVVQLRGSIPLFWSQEASPLNMKPDIILSHKDAMFEATKLHFDNLVTRYGNPIIILNLIKTREKRPRETILRTEFANAVKSINQNLSKDERLRFLHWDLHRHSRRSKATNVLLQLGKVAAFALKLTGIFYCPVTPNMKLEGLFPYSFSENNHVIDESVAVQDSISNDENKDYNVKPKTLQSGVLRTNCIDCLDRTNVAQYAYGLVALGSQLQALGFTEDPHIDLDNPLAKEVMTAYESMGDTLAFQYGGSAAHNKIFSERRGQWKAAAQSQELIRTIQRYYNNTYLDGAKQKAINIFLGHFQPQQGKPLLWELDSDQHYNVGSYGPNLADGIDGSFIRRSQSDGNIIDESDATIRNLHAPDCQHSSKNPDKRSLLKSASDTFTCESSICNCRQIYGGMGKDQYSESDHICYAEHGDACDCSNFLDVDSLSSGNSCEEELLERSISITSDHIVNEQITEVPASESGPILKEKQSEEKLNKSGKHTDSFEKWVTHGEILYI 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01187 787 ProSiteProfiles Sac phosphatase domain profile. 157 537 IPR002013 GO:0016791
Vifa4g01187 787 MobiDBLite consensus disorder prediction 749 768 - -
Vifa4g01187 787 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 15 742 IPR043573 GO:0043813|GO:0046856
Vifa4g01187 787 Pfam SacI homology domain 93 391 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01187 Vifa-Chr4 358034377 358041828 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01187 18 785 Acyl Lipid Metabolism Gene Families AT5G20840 54.645 0.0 825
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01187 K22913 - gmx:100806380 1221.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01187 4 358034377 358041828 Vifa4g01187 4 358034377 358041828 ECH