Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01184 ATGAAGTTCTTCACAACTACAAGCTTTATTTTCTTCCATATTTTTTTTTATTATAGCTCTTATGCTGGCAATAACAATTACATAAACACAACAACCTATGACCAAGCAAATTTCTTGCCTTATGGAGAAACCTACTTCAACTTCCCAACGGGTAGATTCTCTGATGGCCGTTTGATATCAGATTTTATTGCTGAATACGCAAATATTCCACTGGTTCCACCATTTCTACAACCTGGCTTTAATCAATATTACAATGGAGTGAATTTTGCATCTGGTGGAGCAGGTGCACTTGTTGAGACTTTCCAAGGGTCGCAATCAACAATATGGCAATGTGTAGTTAGGTAG 345 0.371 MKFFTTTSFIFFHIFFYYSSYAGNNNYINTTTYDQANFLPYGETYFNFPTGRFSDGRLISDFIAEYANIPLVPPFLQPGFNQYYNGVNFASGGAGALVETFQGSQSTIWQCVVR 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01184 114 Gene3D SGNH hydrolase 19 112 IPR036514 -
Vifa4g01184 114 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 22 105 IPR044552 -
Vifa4g01184 114 Pfam GDSL-like Lipase/Acylhydrolase 21 97 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01184 Vifa-Chr4 355899724 355900385 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01184 14 100 Acyl Lipid Metabolism Gene Families AT4G10950 37.778 2.83e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01184 - - gmx:100819379 161.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01184 4 355899724 355900385 Vifa4g01184 4 355899724 355900385 ECH