Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01172 ATGGGAAAAGTTCATCCTCAAGCCCTAACTTCCTCTACTTCTTGCAATTTCACTTCCAAGCAAGAAACTTTCACCCTATGGATGAAATCTCTCGTGTTGAATGGAAAAGGATGTACGGTCTTTGATTCCAATGGTCAAATTGCATATAGGGTTGATAACTATAACTCCAATAATAGAGATCAAGTTCATCTCATGGATCAAAGAGGAAATACTTTGTTTACTATACTTAAAAAGCAATATAAGCTGTCGAGGTTTTGGGAGGGTTACAAACTTCCGGTGACAAGGAATGATCAGAAAGGACCATGCTTTCGAGTTGGTAAAACCTATAGTATCACTAAATGGGATTCAAGTTATGAAGTTGAACTTGGATTAGACAAAAACCAACCATATAACTATAAAATTGAAAGTAGCTCTTGCAAGCCAGCTTGCAAAATATTTGATAATCTTGGAGTGATAGTTGCTGAGCTAAGGAGAAAGAAGTCAACTTGTGGAATTGATTTAGGAGATGATGTTTTCACAATGGTGGTAGAGCCAAATATTGATCTTTCTCAAATTATGGGGGTTATTGTAGCTTATAGTCTTATTAAAAGTAAAATGTAA 600 0.355 MGKVHPQALTSSTSCNFTSKQETFTLWMKSLVLNGKGCTVFDSNGQIAYRVDNYNSNNRDQVHLMDQRGNTLFTILKKQYKLSRFWEGYKLPVTRNDQKGPCFRVGKTYSITKWDSSYEVELGLDKNQPYNYKIESSSCKPACKIFDNLGVIVAELRRKKSTCGIDLGDDVFTMVVEPNIDLSQIMGVIVAYSLIKSKM 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01172 199 Pfam LURP-one-related 17 190 IPR007612 -
Vifa4g01172 199 Gene3D - 14 198 IPR038595 -
Vifa4g01172 199 PANTHER - 21 193 IPR007612 -
Vifa4g01172 199 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Vifa4g01172 199 SUPERFAMILY Tubby C-terminal domain-like 18 195 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01172 Vifa-Chr4 352535092 352536001 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01172 - - gmx:100820270 319.316