Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01166 ATGCGGAAATCCGCTGCAGACAGATTCAGGCATCTTTTCAACCGTTCACTCGTTGCTTCCCAACATCGTCATCGTCCAATTAATCCTATCCTCTTTCGATCGTTGTCTTCCATGGCTTCTCATTCTTCGCCTTTCCCTGTTACCGCTCAAAATATCAACCCACAGGTTCTGAAATGTCAGTATGCTGTTCGAGGAGAGATTGTTACACTTGCTCAGAATTTGCAAAAAGATTTGCTGGCCAATCCAAGCGCTCATTCTTTTGAAGAGATAATTTACTGCAACATTGGAAATCCTCAGTCTCTTGGCCAGCAGCCAATAACTTTTTTCCGAGAGGTTCTTGCATTATGTGACTATCCAGCTCTTTTGGACAAAAGTGAAACTCAGGGTTTGTTCAGTGCTGATTCAATAGAGCGAGCTTGGCAGATTGTGGATCAGATTCCTGGGAGAGCAACGGGTGCCTATAGTCATAGTCAGGGTATTCAGGGTTTGCGTGATACAATCGCTGCTGGAATTGGAGAGCGTGATGGTTTTCCTGCTAATCCCGATGACATTTTCTTGACAGACGGTGCAAGCCCAGCAGTCCATATGATGATGCAACTACTCACTAGATCAGATAATGATGGTATTTTGTGTCCCATCCCTCAGTACCCTCTCTACTCAGCCTCAATTACCCTCCATGGTGGCCACCTGGTACCTTATTATCTAGATGAAGCAACTGGTTGGGGGCTGGAAATATCCGAACTCAAGAAGCAGTTGGAAGATGCCAGGTCCAAGGGCATCAGTGTTAGGGCTTTAGTTGTTATAAATCCCGGCAATCCAACTGGACAGGTTCTTGCTGAGGAAAACCAAAGGGATATAGTAGAATTTTGCAAGAAAGAAGGTTTGGTTCTTTTGGCTGATGAGGTATATCAAGAAAACATTTATGCTCCTGAGAAGAAATTTCACTCTTTCAAGAAGGTATCTCGATCCATGGGATACGGCGACGATGATATCATCTTAGTATCTTTTCAATCCGTCTCCAAAGGCTATCACGGGGAGTGTGGAAAACGTGGAGGTTATATGGAGGTGACTGGGTTTTCTCCAGATGTGAGGGAACAGGTTTATAAAGTGGCATCTGTGAATCTTTGTGCTAACATCACTGGTCAAATTCTTGCAAGTTTGATCATGAGTCCACCTAAGGTTGGAGACGAGTCCTATGAGTCATTCATGGCCGAGAAGGGTGGTATTTTATCTTCTCTTGCTAAGCGTGCAAAGGCACTAGAAGACGCTTTGAACAATTTGGAAGGTGTAACCTGCAACAAAGCAGAAGGGGCAATGTACCTGTTTCCTCGTATTCGCCTGCCCGAAAAGGCTATCAAAGCTGCAGAGGCTGAAAAATCAGCACCTGATGCGTTTTATTGCAAACGCTTACTTAACGCCACAGGAATCGTTGTTGTTCCTGGTTCTGGTTTTGGACAGGTACCCGGCACATGGCATTTTAGGTGCACCATATTGCCTCAAGAAGATAGGATTCCAGCCATTGTCACCCGTTTGACTGAGTTCCATGAAAAGTTCATGGATGAGTTTCGTGATTGA 1575 0.4476 MRKSAADRFRHLFNRSLVASQHRHRPINPILFRSLSSMASHSSPFPVTAQNINPQVLKCQYAVRGEIVTLAQNLQKDLLANPSAHSFEEIIYCNIGNPQSLGQQPITFFREVLALCDYPALLDKSETQGLFSADSIERAWQIVDQIPGRATGAYSHSQGIQGLRDTIAAGIGERDGFPANPDDIFLTDGASPAVHMMMQLLTRSDNDGILCPIPQYPLYSASITLHGGHLVPYYLDEATGWGLEISELKKQLEDARSKGISVRALVVINPGNPTGQVLAEENQRDIVEFCKKEGLVLLADEVYQENIYAPEKKFHSFKKVSRSMGYGDDDIILVSFQSVSKGYHGECGKRGGYMEVTGFSPDVREQVYKVASVNLCANITGQILASLIMSPPKVGDESYESFMAEKGGILSSLAKRAKALEDALNNLEGVTCNKAEGAMYLFPRIRLPEKAIKAAEAEKSAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQEDRIPAIVTRLTEFHEKFMDEFRD 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01166 524 FunFam alanine aminotransferase 2 152 398 - -
Vifa4g01166 524 SUPERFAMILY PLP-dependent transferases 52 514 IPR015424 -
Vifa4g01166 524 CDD AAT_like 137 513 - -
Vifa4g01166 524 Pfam Aminotransferase class I and II 149 498 IPR004839 GO:0009058|GO:0030170
Vifa4g01166 524 FunFam Alanine aminotransferase 2 396 522 - -
Vifa4g01166 524 Gene3D - 101 151 - -
Vifa4g01166 524 Gene3D Aspartate Aminotransferase, domain 1 50 522 IPR015422 GO:0003824
Vifa4g01166 524 FunFam Alanine aminotransferase 2 101 151 - -
Vifa4g01166 524 Gene3D - 152 398 IPR015421 GO:0003824
Vifa4g01166 524 PANTHER ALANINE AMINOTRANSFERASE 40 523 IPR045088 GO:0008483
Vifa4g01166 524 Coils Coil 410 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01166 Vifa-Chr4 351548090 351553036 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01166 K00814 - gmx:100127413 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01166 4 351548090 351553036 Vifa4g01166 4 351548090 351553036 ECH