Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01154 ATGGATTCCTCTTCCGACGAAGATGACGACCACCACACCCTGATCCACCAGTACTCCACAAAACCCCGAACTCCTCCCTCCGCCACCGCCACCGCCACCTCTGCCGCGGCATTCCACGTCGAGGATCTCAACTCACGGTTCCAGCGACTCAATTGCAAGCTCCAGAAAAGGTACATTATCGCCGTTATCTTTCTCCTCATCTTATTTCTCCTCTTCTCAATTCCCAATCTCCGGCAACAATTCTCCGCCGCCACATTCATCTCCGATTCCGTTTCCGATCGAATGAAGGAAGCGGAATTACGCGCCATTTACCTCTTGCGCCAACAACAACTATCTCTCTCAACCGCTTTCAATCGCACATTCCAAACCAACGCTTCCGATCCGAACCGAAACCCGAACCTATTGGAAGATCTGAAATCTGCACTATTCAAACAAATTTCAATCAACAACGAGATTCAACAGATTCTATTGAATACGCATAAGACAGGAAAAAACGTGGTTGATCCTGAATTCAATTTCGGAAGTTTTGATGTTGGGAATTACGATAGATGTAGAACAGTTGATCAGAATTTATCTCAGAGAAAAACCATTGAATGGAACCCTAAAGAAGGGAAATTTTTGGTTGCTATTTGTGTTTCTGGTCAAATGTCAAACCATTTGATTTGTTTAGAAAAGCACATGTTTTTCGCTGCTCTTCTTAATAGGGTTTTGGTGATTCCGAGTTCGAAAGCTGATTTTCAATATGATAGAGTTGTTGACATTGATCACATAAACAAATGCTTAGGGAAAAAAGTTGTTATTTCCTTTGATGAATTTGCTAACGTTAAGAAGGGTCACTTGCACATTGATAAGTTTCTTTGTTATTTTGCTTTGCCTCAACCTTGTTATTTGGATGATGAAAAGTTGAAGAAGTTGAGTGGTTTGGGTTTGTCTATGAGTAAACCTAAGGCTGTTTGGGAGGATGAGGATACTCGGAAGCCAAAGAAGAAGACTGTTCAAGATATTATGGCTAAGTTTTCTTATGAAGATGATGTTATGGCGATTGGGGATGTGTTTTATGCTGATGTGGAGCATGAATGGGTTATGCAACCGGGTGGACCGATTGCTCACAAATGCAAGACGCTGATTGAACCTAGTCGGCTTATTATTCTTACTGCTCAGCGTTTTATTCAGACATTCTTGGGAAGGAACTTTGTTGCGTTGCATTTTCGGAGGCATGGTTTTTTGAAATTCTGTAATGCTAAAAAACCAGGTTGCTTTTACCCCATTCCTCAAGCAGCAAATTGCCTCTCAAGGGTGGTTGAGAGGGCCGATGCACCCATCATATATCTTTCTACTGATGCAGCTGCAAGTGAAACTGACCTACTTCAGTCACTGGTTGTGCTGAATGGCAAGCCTGTTCCACTTGTAATTCGGCCAGCTCGGAATATAGCAGAAAAATGGGATGCTTTGTTATACAGACATCACATTGAAGGAGATCCACAAGTGGAAGCTATGTTGGACAAGACTATTTGTGCCATGTCTAGCGTGTTCATCGGAGCACCTGGTTCTACTTTCACTGAAGACATCTTGCGGCTGAGAAAGGACTGGGGATCAGCATCACAGTGTGATGAGTACCTTTGCCAAGGTGAAGAGCCAAACTTTGTTGCGGAAAATGAATGA 1662 0.429 MDSSSDEDDDHHTLIHQYSTKPRTPPSATATATSAAAFHVEDLNSRFQRLNCKLQKRYIIAVIFLLILFLLFSIPNLRQQFSAATFISDSVSDRMKEAELRAIYLLRQQQLSLSTAFNRTFQTNASDPNRNPNLLEDLKSALFKQISINNEIQQILLNTHKTGKNVVDPEFNFGSFDVGNYDRCRTVDQNLSQRKTIEWNPKEGKFLVAICVSGQMSNHLICLEKHMFFAALLNRVLVIPSSKADFQYDRVVDIDHINKCLGKKVVISFDEFANVKKGHLHIDKFLCYFALPQPCYLDDEKLKKLSGLGLSMSKPKAVWEDEDTRKPKKKTVQDIMAKFSYEDDVMAIGDVFYADVEHEWVMQPGGPIAHKCKTLIEPSRLIILTAQRFIQTFLGRNFVALHFRRHGFLKFCNAKKPGCFYPIPQAANCLSRVVERADAPIIYLSTDAAASETDLLQSLVVLNGKPVPLVIRPARNIAEKWDALLYRHHIEGDPQVEAMLDKTICAMSSVFIGAPGSTFTEDILRLRKDWGSASQCDEYLCQGEEPNFVAENE 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01154 553 MobiDBLite consensus disorder prediction 1 29 - -
Vifa4g01154 553 CDD O-FucT_like 369 527 - -
Vifa4g01154 553 MobiDBLite consensus disorder prediction 1 17 - -
Vifa4g01154 553 FunFam O-fucosyltransferase family protein 372 541 - -
Vifa4g01154 553 Gene3D - 371 541 - -
Vifa4g01154 553 PANTHER GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 2 88 553 IPR045130 GO:0036066|GO:0046922
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01154 K03691 - gmx:100776069 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01154 4 349408478 349411674 Vifa4g01154 4 349408478 349411674 ECH