Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01149 ATGAAGCAGAAAGAGTTGACTTTTTTGCTCTGCCTCATATGGGCACTAACCCTCCTTTACGGTGAAATGTTCGCTTACTGGCTTCCATCAATCTTCACCTGTTCTTGGCCCCATTTCAAGGTTCAAACAAAGAATGATAGTTACCAAAATGATTATGTAAAAGTTGCTGTTATTACAGATCCACAGCTCATGGATACAACTTCTCTCCGTCTTCCTGAGAAATCTCTTGCACTAGAGCTTGTTAAATTCTACACCGATTTAAATATGAGGAGATCGTTCTTTTCATCTATCCTTCCTTTCAATCCTGATGTCCTATTGTTTTTAGGGGATTACTTCGATGGAGGTCCTTATTTATCTGACGAAGAATGGAATGAGTCTTTCAATCGCTTTAAACATATATTTGGTTTGAATGAACAAGGAAAATACAAAGACAAGCAAGTTTACTTCATTTCTGGAAACCATGATATTGGTTATGAAAGTCTTCATTATGCAAAACCAAAGGTTATCGGTCGCTACGAGGAAAAATTTGGGATTAGAAACTACAAATTTACAGTTGGAAAAGTGGATTTTATTGCAGTTGATGCGCAAATGCTTGATGGACACCCACAAAAGCAACTGACTTCTCAAGTTTGGGAGTTTGTAAAGAATATCTCTGTAGATAATGTAATTTGTCCAAGAGTCTTATTAACACACATTCCTTTATATCGACCGGATGGTACTTACTGTGGCCCTGATCGTAGTTCCCCAATTATCAATCAGGCGATAAATCGTGCAGCGTATGATAAGAGTGGCGATATAATATATCAGAATTATGTTTCTGAGAAGTCATCAAAGTATTTACTAGATACTATCAAACCTAAGCTTATTTTATCTGGCCATGATCACGATCAATGCACCATCACTCATCAATCTAAATCTGGGTCTGTAAAGGAGCACACTCTAGGTACTATAAGTTGGCAACAAGGAAATTGGTATCCTTCTTTCATGCTCTTATCAGTCGATAACTCCACTCTTCGAAACACTTCCATTCCCGAAGAGCCTTTGTTGACTCATCTATGTTACCTTCCAAAGCAGTTACACATTTATATGTGGTATATTGTGCTATTTGGTTTTACCCTTCTTGCCCTCCTATTTATGCCAACAAGCAGCACAAGTTTCTGGCATCAGTGTTGGAACTTGGCGGGCCGTTTTAAACAACTTATAGCTTCTATCGTATCGAGAAATGAAACAAAAGAGAAAGATGAGGATGCCAACTATGAATATGAGATGATGTGGGATGCAGAAGGTTCAATGCATCTTATAAAGAAACCTTTGAAAGCATCCGCTTCTAATTCTAATGAAAGAAGCTTAGGAGAAAGGGGTAATGTCATAATGCGGCCAACTGCTAGAAAAAATACTGGGCAAGGAGACTTCTCTATGAATATGGATATGGCTTCAAGCGCCGGGCTTGATCCTCTAGCAAAAATGCCTCAAAGAACAGGAAAATCAAGGACAACAATTACAATCCAAAGATTACTACGCACGCTGCGAATGCTGACCGTTATTGCAGCAGTCAACGTTCCTCTTTACATGATGTTGCTATTCAAGGATTGGATTGAAAAGTAA 1605 0.385 MKQKELTFLLCLIWALTLLYGEMFAYWLPSIFTCSWPHFKVQTKNDSYQNDYVKVAVITDPQLMDTTSLRLPEKSLALELVKFYTDLNMRRSFFSSILPFNPDVLLFLGDYFDGGPYLSDEEWNESFNRFKHIFGLNEQGKYKDKQVYFISGNHDIGYESLHYAKPKVIGRYEEKFGIRNYKFTVGKVDFIAVDAQMLDGHPQKQLTSQVWEFVKNISVDNVICPRVLLTHIPLYRPDGTYCGPDRSSPIINQAINRAAYDKSGDIIYQNYVSEKSSKYLLDTIKPKLILSGHDHDQCTITHQSKSGSVKEHTLGTISWQQGNWYPSFMLLSVDNSTLRNTSIPEEPLLTHLCYLPKQLHIYMWYIVLFGFTLLALLFMPTSSTSFWHQCWNLAGRFKQLIASIVSRNETKEKDEDANYEYEMMWDAEGSMHLIKKPLKASASNSNERSLGERGNVIMRPTARKNTGQGDFSMNMDMASSAGLDPLAKMPQRTGKSRTTITIQRLLRTLRMLTVIAAVNVPLYMMLLFKDWIEK 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01149 534 CDD MPP_Cdc1_like 56 322 - -
Vifa4g01149 534 Gene3D - 90 351 IPR029052 -
Vifa4g01149 534 SUPERFAMILY Metallo-dependent phosphatases 51 357 IPR029052 -
Vifa4g01149 534 PANTHER METALLO PHOSPHOESTERASE RELATED 1 459 IPR033308 GO:0006506
Vifa4g01149 534 Pfam Calcineurin-like phosphoesterase 54 296 IPR004843 GO:0016787
Vifa4g01149 534 FunFam Calcineurin-like metallo-phosphoesterase superfamily protein 80 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01149 Vifa-Chr4 348214612 348219672 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01149 K23362 - gmx:100776604 853.973