Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01143 ATGGCTACTAATCAAAATTTCAAGAATGCTACCATAGCATTCTTGGTTCCTCTTCCTTCCATCATCTTCTACCTCACCTTCCTCAACAACTGTCACTCATCAATCACCAATCCAAACAACCCTTCTTTTTCCTCATCTCTATGGACATGGTGCTATCACCACCCTCTTCTCTTCGCCAACGCTCTCTTCTTCCTCAACGTCAATCTCATCTTCTGGCTCATTGGTCAAATCCAATCTAGTCACTGGATGATTGATCCATATTGGACTGTGATTCCTGTGATGCTTGTTCATTACTATGCAACTCACCCTTTGGCTCAATATGATTGGTGGAGGTCGAAAGTTGTGATTTTTTTGACATGGGTTTGGAGTATTAGGCTCACTCATAATTACTTCAGACGTGAAAAGTGGCAATGGGGTGCTAGAGAGGATTGGCGTTTCACTGAGATGAGTCAACAGTATGGAAAACATTGGTGGTGGATTTCATTCTTTGCTGTTTATGTCTCACAGCAGATGTTTTTGATTGGACTGTCACTTCCTTTATATGTTGTACACTTTGTGAATAAGCCTTTGAGTATCTTGGATTTGGTGGCCATTCTTGTTTGTTTAAGCGGCGTTGTTATAGCGTACTTTGCTGATACACAGCTCCACGACTTTATGAGTAGAAACAACAAGCTAAAAGGGCTTGGTAAGCCTGTAGTTCCTGTACTTGAAAATGGCTTATGGTATTACTGTCGGCATCCAAATTACTTCGGTGAGACGTTATGGTGGTGGGGACTGGTTGTGTTTGCATGGAGCCTAGGACATGGGTGGACATTTGTTGGAGCTTTTGTTAATACATTGTGTTTGGCTTATGTTACTAGGCTTGTGGAGGATAAGATGTTGAAACAAGAGAGTAGAGCAGAGGCGTTTAGGCTTTACCAGAAGACAACTTCTGTGTGGATACCTTGGTTCAAGTCATTTTCTTCTGAAGTTAAAAATAAGAATGCTTGA 990 0.4152 MATNQNFKNATIAFLVPLPSIIFYLTFLNNCHSSITNPNNPSFSSSLWTWCYHHPLLFANALFFLNVNLIFWLIGQIQSSHWMIDPYWTVIPVMLVHYYATHPLAQYDWWRSKVVIFLTWVWSIRLTHNYFRREKWQWGAREDWRFTEMSQQYGKHWWWISFFAVYVSQQMFLIGLSLPLYVVHFVNKPLSILDLVAILVCLSGVVIAYFADTQLHDFMSRNNKLKGLGKPVVPVLENGLWYYCRHPNYFGETLWWWGLVVFAWSLGHGWTFVGAFVNTLCLAYVTRLVEDKMLKQESRAEAFRLYQKTTSVWIPWFKSFSSEVKNKNA 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01143 329 Gene3D - 108 317 - -
Vifa4g01143 329 PANTHER 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE 41 321 IPR010721 -
Vifa4g01143 329 ProSiteProfiles Steroid 5-alpha reductase C-terminal domain profile. 197 266 IPR001104 GO:0006629|GO:0016627
Vifa4g01143 329 Pfam Protein of unknown function (DUF1295) 71 310 IPR010721 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01143 Vifa-Chr4 347223994 347225566 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01143 - - lja:Lj3g3v2531230.1 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01143 4 347223994 347225566 Vifa4g01143 4 347223994 347225566 ECH