Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01142 ATGGGTATGAATTTCATGGTTTTTGCAGTGTCGGTGTCATGGTTTTGGTCAATACCTACTTCACACGTGTTTGCAGCAAAACAACAGAAGCTGAGGTTTGATGAAAATGGAGAATTCAAGATATTGCAAGTGGCAGATATGCACTATGCAGATGGAAAGAAAACACTTTGCTTAGATGTTCTTCCTTCTCAAAATGCTTCTTGTACTGATCTTAACACCACTGCTTTCATTCATAGGATGATCCTTGCTGAGAAACCTAATCTTATTGTCTTCACTGGAGATAATATCTTTGGGTTTGATTCGTCGGACTCGGCGAAATCAATGGATGCTGCATTTGCTCCTGCAATTGCATCAAACATTCCTTGGGTGGCTGTTTTAGGAAACCATGACCAAGAAGGATCACTCTCTAGGGAAGGTGTGATGAAATATATTGTTGGGATGAACAACACTTTATCTAGAGTCAAACCTGGAAAAGTGCGTAGCATCGATGGTTTTGGAAACTATAACTTGGAGCAAGTTTGGTTCGAGAAAACGTCTGCGGAGCTTCGGAAAAAATACATAAAAGGACATGTGCCTCAGAAAGAAGCTGCTCCTGGTCTTGCATACTTTCACATCCCCTTGCCCGAATACGCAAGTTTTGACTCATCCAACATGACAGGCGTGAAAATGGAAACATATGGCGACAATGGCATTAGTTCTGCTTCGGTGAACTCTGGTTTCTTCACAACCTTGGTTACAGCAGGAGACGTGAAGGCCGTTTTCGTTGGCCATGATCACATCAATGACTTCTGCGGCAAGCTAATGGATATACAACTTTGTTATGCTGGAGGGTTTGGATACCATGCTTATGGACAAGCTGGATGGTCTAGGAGAGCAAGAGTGGTTGTAGCTAGCTTGGAGAAGACAGGTAAGGGAAGTTGGGGAGATGTCGAGTCGATTAAAACATGGAAACGCCTTGATGATGAGCATCTCACTAGAACCGATAGTGAAGTCCTGTGGAGCAAGAGCACTCATGGTAAGGAAGCAGTGGCTAAAAACAAATTGGTGGAAAGTGAGGATTTGAGAAAGTGA 1071 0.4304 MGMNFMVFAVSVSWFWSIPTSHVFAAKQQKLRFDENGEFKILQVADMHYADGKKTLCLDVLPSQNASCTDLNTTAFIHRMILAEKPNLIVFTGDNIFGFDSSDSAKSMDAAFAPAIASNIPWVAVLGNHDQEGSLSREGVMKYIVGMNNTLSRVKPGKVRSIDGFGNYNLEQVWFEKTSAELRKKYIKGHVPQKEAAPGLAYFHIPLPEYASFDSSNMTGVKMETYGDNGISSASVNSGFFTTLVTAGDVKAVFVGHDHINDFCGKLMDIQLCYAGGFGYHAYGQAGWSRRARVVVASLEKTGKGSWGDVESIKTWKRLDDEHLTRTDSEVLWSKSTHGKEAVAKNKLVESEDLRK 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01142 356 SUPERFAMILY Metallo-dependent phosphatases 37 308 IPR029052 -
Vifa4g01142 356 Gene3D - 38 306 IPR029052 -
Vifa4g01142 356 Pfam Calcineurin-like phosphoesterase 39 260 IPR004843 GO:0016787
Vifa4g01142 356 PIRSF Ptase_At2g46880 1 173 IPR011230 -
Vifa4g01142 356 PIRSF Ptase_At2g46880 171 333 IPR011230 -
Vifa4g01142 356 CDD MPP_Dcr2 37 284 - -
Vifa4g01142 356 PANTHER PHOSPHATASE DCR2-RELATED-RELATED 13 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01142 Vifa-Chr4 346802838 346804998 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01142 - - tpra:123884645 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01142 4 346802838 346804998 Vifa4g01142 4 346802838 346804998 ECH