Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01140 ATGGCCATGGGTGGAAAACGGAAGAGGAACCAGGATTCCGATGGCGAAGAAGATTCTTCCAAGAGAAAAATCAAAACCGAGACGAAGGAACCATTCCGTCCTTCCATGATCAAAAACAAGGAAAAGAGATCCGAAGTTCATGCCAAACTTAAGCATCAGAAAAAGCTCGAGAAACGCGCTAAATCGAAGGCTCGTGATGCTGCCGTCAAGAGAGCCATCGAGCTCGGCGAAGAGCTTCCAGAGAAGAAGGTGCCTCGTACGATTGAGAATACAAGGGAAGTAGACGAGACTGTTTGCAAGCCTGATGATGAAGAGCTATTTGCTGGAAATGATGCTGATGAATTCAGTTCAATTTTAAATCGGCAAAATAATCCCAAGATATTAATCACCACTTGCCGCTTCAATTCTACAAGGGCTCCTGCTTTTATATCAGAACTGCTTCAGATTATACCAAATGCACATTACTTCAAGAGAGGAACCTATGAATTAAAAAAGATTGTAGAATATGCAAATAAAAAGGACTTCACATCTATTGTAGTTGTACACACCAATCGCAGGGAACCAAATGCTCTCCTAATTATAGGCTTACCTGATGGACCTACTGCTCATTTCAAACTCACAAATCTTGTTTTACGCAAGGATATTAAGAATCATGGAACTCCAACTAGTCACCGGCCTGAGCTTGTTTTGAACAACTTCACAACACGTCTAGGGCATAGAGTAGGAAGAATGATTCAGTCCCTTTTCCCGCAAGATCCAGAGTTTAAAGGCCGACGTGTAGTCACATTCCACAACCAGAGGGACTTCGTATTCTTCCGGCATCATCGGTATATTTTCGAAAAAAAAGAAATTAAAAAGATAGAGTCTAAAGGTAAAAAGGACGAGGATGGCGAGAGTGAGAAAGTTCCTGACCATAAAACAATTGCTCGGCTTCAGGAATGCGGCCCTCGTTTCACATTGAAATTAGTTAGCCTGCAGCATGGAACATTTGACACTAAAGGTGGAGAATACGAGTGGGTTCACAAGCCGGAAATGGACACAAGTCGAAGGAGGTTCTTCTTGTGA 1065 0.4254 MAMGGKRKRNQDSDGEEDSSKRKIKTETKEPFRPSMIKNKEKRSEVHAKLKHQKKLEKRAKSKARDAAVKRAIELGEELPEKKVPRTIENTREVDETVCKPDDEELFAGNDADEFSSILNRQNNPKILITTCRFNSTRAPAFISELLQIIPNAHYFKRGTYELKKIVEYANKKDFTSIVVVHTNRREPNALLIIGLPDGPTAHFKLTNLVLRKDIKNHGTPTSHRPELVLNNFTTRLGHRVGRMIQSLFPQDPEFKGRRVVTFHNQRDFVFFRHHRYIFEKKEIKKIESKGKKDEDGESEKVPDHKTIARLQECGPRFTLKLVSLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01140 354 ProSiteProfiles Brix domain profile. 125 331 IPR007109 GO:0006364|GO:0019843
Vifa4g01140 354 SMART Brix_2 128 325 IPR007109 GO:0006364|GO:0019843
Vifa4g01140 354 Pfam Brix domain 136 323 IPR007109 GO:0006364|GO:0019843
Vifa4g01140 354 SUPERFAMILY Class II aaRS ABD-related 124 328 - -
Vifa4g01140 354 Gene3D - 125 321 - -
Vifa4g01140 354 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 34 354 IPR044281 GO:0006364|GO:0042134
Vifa4g01140 354 MobiDBLite consensus disorder prediction 1 67 - -
Vifa4g01140 354 FunFam Ribosome production factor 1 125 321 - -
Vifa4g01140 354 MobiDBLite consensus disorder prediction 7 46 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01140 K14846 - gmx:100785331 598.201