Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01131 ATGAACATGTGGTGTTGTAAGCTAGTTTGTCTCATAGAAAATTTGACTGACTCTATTATTTCCTTGACTTCTATAAATAATGATATAAACATCACAAACACAAACCATTACACTTCTTCGGATCATCAATTCCACATTACCCTTTACACCTTTTCTCAATACTATTTCATTTTGCTGTTCTTCAAGATGAGTGAAGAGAACGGTGAAGAAGTTCCAAAAACCCGTCCAACTCCTCGTTTGAATGAAAGGATTCTTTCATCTTTGTCAAAGAGATCCGTTGCTGCACACCCTTGGCATGATCTTGAAATTGGACCTGGAGCACCACATATTTTCAATTGTGTTGTAGAGATTACTAAGGGAAGTAAGGTCAAATATGAACTTGACAAAAAGACTGGATTAATTAAGGTTGATCGGATTCTGTATTCGTCCGTTGTTTATCCTCATAACTACGGTTTTATCCCTCGAACTCTATGCGAAGACAACGATCCACTCGATGTCTTGGTTCTCATGCAGGAGCCTGTTATTCCTGGTTGTTTCCTGCGAGCTAGGGCAATTGGACTAATGCCAATGATTGATCAGGGAGAGAAGGACGACAAAATCATTGCGGTATGCGCTGATGATCCTGAGTATAAGCACTATACTGACTACAAAGAACTTCAACCTCATCGCCTGATGGAGATTCGTCGCTTCTTCGAAGACTATAAGAAGAATGAGAATAAGGAGGTAGCAGTTAATGAGTTTTTGCCACCATCCACTGCTGTTGAAGCCATCCAACACTCAATGGATCTCTATGCTGAGTATATTATGCATACATTGAGGAGATAG 825 0.3976 MNMWCCKLVCLIENLTDSIISLTSINNDINITNTNHYTSSDHQFHITLYTFSQYYFILLFFKMSEENGEEVPKTRPTPRLNERILSSLSKRSVAAHPWHDLEIGPGAPHIFNCVVEITKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQEPVIPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTDYKELQPHRLMEIRRFFEDYKKNENKEVAVNEFLPPSTAVEAIQHSMDLYAEYIMHTLRR 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01131 274 Gene3D Inorganic pyrophosphatase 92 270 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vifa4g01131 274 ProSitePatterns Inorganic pyrophosphatase signature. 160 166 - -
Vifa4g01131 274 Pfam Inorganic pyrophosphatase 113 264 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vifa4g01131 274 FunFam Soluble inorganic pyrophosphatase 4 92 270 - -
Vifa4g01131 274 Hamap Inorganic pyrophosphatase [ppa]. 109 265 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vifa4g01131 274 CDD pyrophosphatase 110 262 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vifa4g01131 274 PANTHER INORGANIC PYROPHOSPHATASE 62 274 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vifa4g01131 274 SUPERFAMILY Inorganic pyrophosphatase 89 271 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01131 Vifa-Chr4 342105917 342107984 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01131 K01507 - gmx:100500365 403.675