Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01122 ATGGCCTCAATCTCATCTTCTTCTCTCACTACTAACCTTTTTGATTGCAAAGCTCCTTTTCAACCATCACCTTCTTCTCCTCAATGTATGAGACTAACCTCTCTTCCATCACTCCCTTTGTTGTCTCAGAATCATGCAGTGAAGACAAGTTCTCATTATCGAAAGATTGGTCGTGAGGTTATGGTAATGGCCACTGGAGATGCACCAGCAGATGTTGAATCAACTGAACTACCTGAGTTTGTTAAGAGTCTGCAAGCAACTTGGGACAAAGTTGATGATAAATATGCAGTGAGTACATTGGTTGTAGCTAGTGTGATTGCATTATGGAGCTCAACTGGTTTGATTTCAGCAATTGATAAGCTTCCCTTGATTCCTGGAGTTCTTGAATTAATAGGCATTGGCTACTCGGGGTGGTTTACATACAAGAACCTAGTTTTCAAACCAGAAAGGGAAGAACTTCTACAGAAAATAAAGGAAACAGTTAATGAAATAATTGGGATCAAATAA 507 0.3945 MASISSSSLTTNLFDCKAPFQPSPSSPQCMRLTSLPSLPLLSQNHAVKTSSHYRKIGREVMVMATGDAPADVESTELPEFVKSLQATWDKVDDKYAVSTLVVASVIALWSSTGLISAIDKLPLIPGVLELIGIGYSGWFTYKNLVFKPEREELLQKIKETVNEIIGIK 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01122 168 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 83 166 IPR025564 -
Vifa4g01122 168 PANTHER - 23 166 IPR033344 GO:0009579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01122 Vifa-Chr4 339271367 339272551 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01122 - - aprc:113849332 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01122 4 339271367 339272551 Vifa4g01122 4 339271367 339272551 ECH