Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01095 ATGTTCTTGTTCTTGAAAAGTATGTCTCAAAAATCATTTGTATCGATTCTTGTTCTTGTTTTTTCTTGTGTTATTGTGCTATCCACACCCCCAGAGGATCCAATAAAATGTTCTTCATCAAACAACACAACCTGCACAGTCACAAACTCCTATGGAATGTTTCCTGATAGAACTATATGTCAAGCTTCACAAGCATTGTATCCAACAAATGAACAAGAGTTGATCTCAATGGTTGCATCAGCGAGTAGAGCGAAAACCAAAATCAAAGTCGCGACGCGTTACTCACACAGCATACCGAAATTGGTATGTCCGGAAGATCCAAATGGGATATTAATAAGCACAAGATACCTCAACAAGGTAGTGAAAATCGACGTGGATGAAAAAACGATAACGGTTGAAAGTGGTGTAACGTTGAAGGATTTAATCGATGAAGCTTCGAAAAAGGGTTTGGCTTTGCCCTATACACCATATTGGTATGGTTTGACTATAGGTGGATTAATGGGAACTGGTGCTCATGGAAGCACATTGTGGAATAAAGGAAGTGCTGTTCATGATTATGTGGTTGAGATTAAGATTGTTAGGGCTTCTGATTCTGAAGATGGTTATGCTAAAGTTGAGATTCTTAATCAAAATAATGATGAAGATTTTAGTGCAGTTAAAGTATCACTTGGTGTTCTTGGTGTTATTTCACAGGTTACTCTAAAACTAGAACCAATGTTCAAGCGATCCCTTACATATTTAGCAAAAAATGATTCAGATTTAGGATTGGAAGTGGTTAGTTTTGGACATGAACATGAGTTTGCAGATATAACATGGTACCCAAGTCAAATGAAGGCTATATATCGATTTGATGGTCGTGTTCCTGTAAATACATCTGGCAATGGTCTCTATGACTTTATTCCTTTCCGTCCAACTTCTTCAATTCTATTGGCCGGCATAAGAACACAAGAAGACCGAGATGAATCCACTGGTGATGTTAATGGAAAGTGTAGGCTTGCAAAGCTAACAACAAAGGCTCTAATTACATCTGCTTATGGCCTAACCAATAATGGCATAATCTTTACTGGATATCCTATAATTGGATTTCAAAACCGTCTTCAATCATCGGGGTCATGTTTGGATAGTCTTCATAATGGAAAGATAACAGTATGTGCTTGGGATTCAAGAATAAAAGGAGAGTTTTTTCACCAAACCACATTTAAAATAAGTGTAGCTTTAGTGAAAAACTTTATTGAAGATATACAAAAGCTAGTTGAATTAGAGCCTAAAGGGTTATGTGGAATTGAACAATACAATGGAATATTAATGCGTTATGTCAAAGCTTCGAGTGCTTATTTAGGGAACCAAGAAGATGCTATAGACTTTGATTTCACATATTATCGTAGCAAAGATCCAATGATGCCTAGGCTTTATGAAGACATTATTGAAGAGATTGAACAGATTGGGATGTTTAAGTATGGAGGGTTGCCTCATTGGGGTAAGAATAGAAATTTGGCATTTGAAGGTGTTTCTAAGAAGTACAAAAATGTTGGAAAGTTTTTGAAGGTGAAAGAGAAATATGATTCACAAGGGCTTTTTTCTAGTACTTGGACAGATCAAATGCTTGGATTAAAAGAAGGTGTTACAATATTGAAAAATGGATGTGCTTTAGAAGGTTTGTGTATTTGTTCGGAAGATAATCATTGCAATCCAAGTAAAGGGTATTTTTGTAGACTAGGAAAAGTCTACAAGGAGGCAAGGGTTTGTTCTCGTGTCTGA 1758 0.3646 MFLFLKSMSQKSFVSILVLVFSCVIVLSTPPEDPIKCSSSNNTTCTVTNSYGMFPDRTICQASQALYPTNEQELISMVASASRAKTKIKVATRYSHSIPKLVCPEDPNGILISTRYLNKVVKIDVDEKTITVESGVTLKDLIDEASKKGLALPYTPYWYGLTIGGLMGTGAHGSTLWNKGSAVHDYVVEIKIVRASDSEDGYAKVEILNQNNDEDFSAVKVSLGVLGVISQVTLKLEPMFKRSLTYLAKNDSDLGLEVVSFGHEHEFADITWYPSQMKAIYRFDGRVPVNTSGNGLYDFIPFRPTSSILLAGIRTQEDRDESTGDVNGKCRLAKLTTKALITSAYGLTNNGIIFTGYPIIGFQNRLQSSGSCLDSLHNGKITVCAWDSRIKGEFFHQTTFKISVALVKNFIEDIQKLVELEPKGLCGIEQYNGILMRYVKASSAYLGNQEDAIDFDFTYYRSKDPMMPRLYEDIIEEIEQIGMFKYGGLPHWGKNRNLAFEGVSKKYKNVGKFLKVKEKYDSQGLFSSTWTDQMLGLKEGVTILKNGCALEGLCICSEDNHCNPSKGYFCRLGKVYKEARVCSRV 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01095 585 Gene3D - 397 497 - -
Vifa4g01095 585 SUPERFAMILY FAD-binding/transporter-associated domain-like 55 238 IPR036318 GO:0050660
Vifa4g01095 585 NCBIfam FAD-dependent oxidoreductase 30 582 IPR010030 -
Vifa4g01095 585 Pfam FAD binding domain 65 195 IPR006094 GO:0050660
Vifa4g01095 585 FunFam L-gulonolactone oxidase 5 119 238 - -
Vifa4g01095 585 ProSiteProfiles PCMH-type FAD-binding domain profile. 58 239 IPR016166 GO:0071949
Vifa4g01095 585 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Vifa4g01095 585 PANTHER GULONOLACTONE OXIDASE 16 560 - -
Vifa4g01095 585 Pfam D-arabinono-1,4-lactone oxidase 434 533 IPR007173 GO:0003885|GO:0016020
Vifa4g01095 585 Gene3D - 119 238 IPR016169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01095 Vifa-Chr4 322518715 322521241 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01095 K00103 - gmx:100790483 935.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01095 4 322518715 322521241 Vifa4g01095 4 322518715 322521241 ECH