Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01092 ATGCAGCAGACACCTCAAATGATTCCTATGATGCCTTCTTTTCCACAAACAAACATAACCACTGAGCAGATTCAAAAATATCTTGACGAAAACAAGAAACTGATTCTCGCAATACTAGACAATCAAAATCTTGGGAAACTTGCAGAGTGTGCCCAGTATCAAGCTCAGCTCCAGAAGAATTTGATGTATTTAGCTGCGATTGCTGATGCGCAGCCACAAACACCAACCTTGCCTCCGCAGATGGCCCCGCACCCTGCGATGCAACAAGGGTTCTTTATGCAGCATCCTCAAGCTGCAGCAATGGCTCAGCAACAAGGGATGTTCCCGCAAAAGATGCCAATGCAATTCGGTGGTAATCCACATCAAATGCAGGACCAACAACAGCAACAGCAGCAGCAACTTCATCAGCAGGCTATGCAAGGTCAAATGGGACATAGACCCGGAGGGATAAATAACGGCATGCATCCAATGCACAATGTGCACAACGAGGCTGCTCTCGGAGGCAGTGGTGGTGGTCAGAATGACGGACGTGGTGGTGGAAGCAAGCAAGATGCTTCTGAAACTGGGACAGCTGGTGGAGATGGTCAAGGAAGCTCTGCCGCTGCTGCAGCCACGCATAACAGCGGGGACGCTTCGGAAGAGGCAAAGTGA 651 0.4962 MQQTPQMIPMMPSFPQTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQTPTLPPQMAPHPAMQQGFFMQHPQAAAMAQQQGMFPQKMPMQFGGNPHQMQDQQQQQQQQLHQQAMQGQMGHRPGGINNGMHPMHNVHNEAALGGSGGGQNDGRGGGSKQDASETGTAGGDGQGSSAAAAATHNSGDASEEAK 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01092 216 PANTHER SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN 2 209 IPR044779 GO:0003713
Vifa4g01092 216 MobiDBLite consensus disorder prediction 179 206 - -
Vifa4g01092 216 MobiDBLite consensus disorder prediction 117 140 - -
Vifa4g01092 216 MobiDBLite consensus disorder prediction 113 216 - -
Vifa4g01092 216 Pfam SSXT protein (N-terminal region) 18 74 IPR007726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01092 Vifa-Chr4 321112472 321115517 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01092 - - gmx:100804074 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01092 4 321112472 321115517 Vifa4g01092 4 321112472 321115517 ECH