Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01088 ATGAAAACAAAGCATAAGAAAAATCATTCAGTTACTAATACCATCACCAAAATAGCGAAACCTGCGGTGTATCTTACGCTCCTCTTGCTAACTTACACGTTAGGATACTTATCCCCATCTACCTCTCCCGATCTCGACTCGTTCCGAGTCAAAACTCAGTGCGCTAATCCAATCCCTCAGGAAAGCATTCGCGAGACACTTATCAACCGTTTCTTCAACGGAATTTCCCCGTTTATCAACTTTCCGCCACCGCATGCAGCAGAAAAGCTTCGTCGAAGTAAGGAGATCACAGGTTGGGGTTCAAACGCCCCCGTTTTTGAGAGACTCATCCGTAAGGTAAAGCCTCAGATCATCGTTGAAGTTGGAACGTTCCTCGGTGCGTCGGCGGTTCACATGGCTGAGTTAACTCAACGAATCGGTTTAAAAACTCATATTCTCTGTATTGATGATTTTCGTGGTTGGGCCGGGTTTAGAGACGATTTCAAAAACATGGAAATTTTAAACGGCGACGTTTTTCTTTATTTTCAGTTTCTTCAGAATGTTGTTACTTTTAACCGAACCGGGTCGATTTTACCCGTACCGTTTTCAAGCGTTTCGGCGTTAACAAAGCTTTGTGAATTGGGTGTTAGGCCTGATTTGGTAGAGATTGATGCGGGTCATGATTTTTTATCGGCCTGGTCTGATATCAATTGGGGTTTTCGGATCCTCCGACCCGGTGGGGTTATTTTCGGGCATGATTATTTCAATGGTGCCGATAATAGAGGAGTTAGAAGAGCGGTTAAATTATTTGCTAGGATTCATAATTTTAATGTAAAAATTGATGGAGGACATTGGGTCATATACTCCACTCCGCTTATGCAATGA 864 0.4306 MKTKHKKNHSVTNTITKIAKPAVYLTLLLLTYTLGYLSPSTSPDLDSFRVKTQCANPIPQESIRETLINRFFNGISPFINFPPPHAAEKLRRSKEITGWGSNAPVFERLIRKVKPQIIVEVGTFLGASAVHMAELTQRIGLKTHILCIDDFRGWAGFRDDFKNMEILNGDVFLYFQFLQNVVTFNRTGSILPVPFSSVSALTKLCELGVRPDLVEIDAGHDFLSAWSDINWGFRILRPGGVIFGHDYFNGADNRGVRRAVKLFARIHNFNVKIDGGHWVIYSTPLMQ 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01088 287 Pfam Methyltransferase domain 119 247 - -
Vifa4g01088 287 Gene3D Vaccinia Virus protein VP39 101 276 IPR029063 -
Vifa4g01088 287 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 4 282 - -
Vifa4g01088 287 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 58 261 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01088 Vifa-Chr4 320148955 320149818 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01088 - - gmx:100795196 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01088 4 320148955 320149818 Vifa4g01088 4 320148955 320149818 ECH