Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01020 ATGGGAGAACAAGAAGAGTGGGCACAGCCACAAAGTGGGTTACTGCCAAATGGTTTGCTACCAAATGAAGCTGCTTCTGTGATACAGGTGCTTGACTCGGAGCGGTGGTTGAAGGCTGAACAAAGAACTGCAGAGCTAATTGCTTGCATTCAGCCTAATTCGCCCTCCGAGCAACGCCGAAATGCAGTTGCTGAGTATGTCCAAAAGCTGATCACAAAGTGCTTCCCTTGTCAGGTGTTCACCTTTGGGTCTGTTCCCCTAAAAACGTATTTGCCTGATGGAGATATTGACTTAACTGCATTCTGTAAGAATCAAGCTTTGAAGGATAGTTGGGCACACCAGGTTCGTGACATGCTGCAGAATGAGGAGAAGAATGAGAATGCAGATTTTCATGTCAAGGAGGTTCAGTACATCCAAGCAGAAGTGAAGATTATTAAATGTCTTGTTGAGAATATCGTAGTAGACATTTCATTTAATCAGCTTGGAGGGTTGTGTACCCTTTGTTTTCTTGAGGAGGTTGATAGTCTGATCAACCAAAACCATTTATTCAAGCGTAGCATTATACTGATAAAAGCATGGTGTTACTACGAGAGCCGAATACTCGGTGCCCACCATGGACTTATCTCTACTTATGCATTGGAGACTTTGGTTCTTTACATATTTCATGTTTTCAACAATTCCTTTGCTGGACCACTTGAGGTTTTGTATCGATTCTTGGAATTCTTTAGTAAGTTTGACTGGGATAATTTCTGCGTAAGTTTATGGGGCCCAGTACCAATTATTTCACTACCAGATGTGACAGCCGAGCCTCCTCGAAAAGATGCTGGAGAATTACTGCTCAGTAAATCATTTCTTGATGCATGTAGCTCAGTTTATGCTGTTTTGCCGGGTGGTCCAGAAAATCAGGGGCAAACCTTTGTTTCCAAGTATTTCAATGTCATTGATCCTTTGCGTGTGAACAATAACCTTGGCCGCAGTGTAAGCAAAGGTAATTTCTTCAGGATACGCAGTGCCTTTGCATTTGGGGCTAAAAAGTTGGCTAGATTACTTGATTGTCCAAAGGATGAGTTGTTTCTTGAAATCAATCAGTTCTTTTTGAACACTTGGGACCGGCATGGAAGTGGGCAACGACCTGATGTTCCAAGCAATGACCTATGGCGTTTGAGGTTATCTAATCATGACCAATCACTGGGTTCTGAGAATCTCCGGAACAATAGTCATAAGATTGATAATACCTCCAATCGCGAGGTTCATGTTGAAAGGGAACAAATTTCACACAGTGGTGTATCTCAGCATAGTAATTTATCGTCTGAAAACTCGTCTAAAAATAGTGATGTATCTACATTTTCCCATACTCAGAGTCAAAAGAGTCATGTAAACCAAAATAATTCAAGGAACTTGAGTCAAGCTCGAAGGGAAACTACTTCTACTCAAGGTGCTTATGTTGATAAAATTCAGAAAAATATGAAAACTGATAATCCGGTTAGTGATCTTCGTGGAAAGTATCTATTTGCCAGGACACGTTCTAGCCCTGAGCTGACTGACTCGTACGGCGAAGTTTCTTCCCAAGGGAGGCGTACAAGAACTGAAAATATTAAAGGCCAGAATTCCTTTGTAAAATTGGAGAATGGTCGTAGGAAGAATTTTGAGCCAGTTGTAGCTGCAAGAGTCGATGACTCATCCGGTAGGCATTCATCTCGTCAAGTTGTTGGCAGTGCTGCTGAACCGATCAATAATCATGATGAACCAAGCTCAGGTGTCCTGGGTGAAGAGTTTGCATCTGTTGCCGGAGCAGGTGGAATGCAGATGATGAATCAGGAGGAGCAAGACCTTTTGAATATGATGGCGTCTCCTGCTGCTCAAGGTTTCAATGGCCAGCATGTTCCAATGAATTTACCTCCAGGTCACCTACCATTCCCATTTCCACCTTCCGTTCTTGCATCAATGGGATATGGTCAACGGAACATGGCTAACTTTCCTTTTATTGAGGCTCCTTGGGGTTCAAATATGCAATTTCCTCAAGGTTTAGTCCCGTCGCCATTGCATCCATATTTCCCTGGATATGGGTTGACCTCAAATACTCAAGATTTAGCTGAACCTGGCAACGAGAATTTCAGTACCGTTGAAGTGAATGTAACAGAAGCTGATAATGATTACTGGCATGAGCAGGAGAGAAGTTCTGCTAGTGGTGTTGAATCAGATAATGGAAATTTCGAAATGATTCCAGATGATAAACAACAATCAACTTCAGGTAGTTATAACTATGCCACGTCTTCTCGAGCAGGAAGCTCTAGTAGTTCTGCCAGAAATCAACAGAAGTTTAGTAGAGAAAATCGTGGGTCAACAAGAGAAGAGCATATTGATAATTTTCACTATCAAGATGGCCGTAGAAATGAGGTTCATTTTGACGATAGAATATCAAATTCTGAGTTACCAAGTGCCCCACCTTCAAGCTCCTTCAGGAGTAAGAGCCCTTCTGAAAGCTCATGGGATGGATCGTCAGCCAAATCCTCAAAGTCGACAAGGGAAAAAAGAGGGAAGAAAAGTACTTCCTCAGTACCCGCAACTGCTCACGACAGAAGCACCGAGCCTGCAACTGGTCTGTCTTTGCAAGTTCAGAGACATCAAATATCTGGTTTTGAAGCTGCTCAAACAAGTGGATCAGATTCTCAATTACCCATGGCTCCTGTGATTTTAGGTCCTGGTTCTCGCCAAAGAGCTATTGATAATTCCGGAGTTGTTCCATTTGCATTCTATCCCACAGGCCCCCCTGTACCCTTTGTTACAATGCTTCCCTTTTTTAATTTTCCAACCGAGTCTTCTGAGACATCAACGAGCAGCTTCAATGGGGAAGAAAGGGCAGAGAACAACGATTCTAGTCTAAATTTTGATTCATCCGAGGTATATGACCACTCTGAAGTGTCGAGCCCTTCAAACTCAATAACAAGGGCGGGTGTAGAGTCATCTGACCACAGGCCTGACATTCTCAATAGTGACTTCGCTAGCCATTGGCAAAATTTGCAATTCGGGCGATTTTGTCAAAGCCCGTTTCAACCTCCTTCAATGATGCATCCTTCGCCTATTATGGTGCCTCCTGCTTATTTGCAGGGGCGATATCCTTGGGATGGTCCTGGGAGACCTCCTTCAGCTAACATGAATCTTGTCTCTCAGGTCGTTAACTATGGGCCACGTCTTGTTCCCGTTCCTCCTCTCCAATCGGTTTCTAGTAGACCTGCAAATGTTTACCAACGTTTTGTAGAAGATATTCCTCGGTATCGAAGTGGTACTGGAACCTACCTGCCGAATCCGAAGGTTTCTGTTCGAGATCGCCATTCGACAAATACCAGAAGGTATGATAGAAGTGACCATCATGGTGATAGAGAAGGAAACTGGAATACGAATTCAAAGTTGCGATCAACCGGACGTGGCCATAATCGCAACCAAGGAGAGAAGCCAATCTCAAAATCAGAGCGGTTGGCGACTAGTGAGAGCCGCACCGAGAGGCCATGGAGTGCACACAGACACGACTCATTTATTCCTCACCAGAATGGTCCAGTCCGTGGAAATTCCTCGCAGAACAGTCACACGAATGTAGCATATGGAATGTACTCTATACCTGGCATGAATCCTAGTGGTGTATCATCCAACGGACCAACAATGCCATCTGTTGTTATGTTGTATCCTTATGATCATAATTCTGGCTACACTTCGCCAGCAGAGCAGCTAGAGTTTGGGTCTTTGGGACCAATGGGCTTCTCCAGCGCGAATGAACTATCGCAGCCGAATGAGGGAACTCGCTCTGGTGGTGGAATACTTGAAGAGCAAAGGTTTCATGGCGGCCCTGCTCAACGATCTTCACCAGATCAACCCTCTTCACCCCATGTCTCAAGGGGCCCTGATTCTAATGTGAGATAA 3915 0.4406 MGEQEEWAQPQSGLLPNGLLPNEAASVIQVLDSERWLKAEQRTAELIACIQPNSPSEQRRNAVAEYVQKLITKCFPCQVFTFGSVPLKTYLPDGDIDLTAFCKNQALKDSWAHQVRDMLQNEEKNENADFHVKEVQYIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLEEVDSLINQNHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHVFNNSFAGPLEVLYRFLEFFSKFDWDNFCVSLWGPVPIISLPDVTAEPPRKDAGELLLSKSFLDACSSVYAVLPGGPENQGQTFVSKYFNVIDPLRVNNNLGRSVSKGNFFRIRSAFAFGAKKLARLLDCPKDELFLEINQFFLNTWDRHGSGQRPDVPSNDLWRLRLSNHDQSLGSENLRNNSHKIDNTSNREVHVEREQISHSGVSQHSNLSSENSSKNSDVSTFSHTQSQKSHVNQNNSRNLSQARRETTSTQGAYVDKIQKNMKTDNPVSDLRGKYLFARTRSSPELTDSYGEVSSQGRRTRTENIKGQNSFVKLENGRRKNFEPVVAARVDDSSGRHSSRQVVGSAAEPINNHDEPSSGVLGEEFASVAGAGGMQMMNQEEQDLLNMMASPAAQGFNGQHVPMNLPPGHLPFPFPPSVLASMGYGQRNMANFPFIEAPWGSNMQFPQGLVPSPLHPYFPGYGLTSNTQDLAEPGNENFSTVEVNVTEADNDYWHEQERSSASGVESDNGNFEMIPDDKQQSTSGSYNYATSSRAGSSSSSARNQQKFSRENRGSTREEHIDNFHYQDGRRNEVHFDDRISNSELPSAPPSSSFRSKSPSESSWDGSSAKSSKSTREKRGKKSTSSVPATAHDRSTEPATGLSLQVQRHQISGFEAAQTSGSDSQLPMAPVILGPGSRQRAIDNSGVVPFAFYPTGPPVPFVTMLPFFNFPTESSETSTSSFNGEERAENNDSSLNFDSSEVYDHSEVSSPSNSITRAGVESSDHRPDILNSDFASHWQNLQFGRFCQSPFQPPSMMHPSPIMVPPAYLQGRYPWDGPGRPPSANMNLVSQVVNYGPRLVPVPPLQSVSSRPANVYQRFVEDIPRYRSGTGTYLPNPKVSVRDRHSTNTRRYDRSDHHGDREGNWNTNSKLRSTGRGHNRNQGEKPISKSERLATSESRTERPWSAHRHDSFIPHQNGPVRGNSSQNSHTNVAYGMYSIPGMNPSGVSSNGPTMPSVVMLYPYDHNSGYTSPAEQLEFGSLGPMGFSSANELSQPNEGTRSGGGILEEQRFHGGPAQRSSPDQPSSPHVSRGPDSNVR 1304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01020 1304 MobiDBLite consensus disorder prediction 1252 1266 - -
Vifa4g01020 1304 MobiDBLite consensus disorder prediction 729 775 - -
Vifa4g01020 1304 FunFam PAP/OAS1 substrate-binding domain superfamily 162 358 - -
Vifa4g01020 1304 Gene3D Beta Polymerase, domain 2 52 161 IPR043519 -
Vifa4g01020 1304 MobiDBLite consensus disorder prediction 556 587 - -
Vifa4g01020 1304 MobiDBLite consensus disorder prediction 1183 1197 - -
Vifa4g01020 1304 SUPERFAMILY Nucleotidyltransferase 22 201 IPR043519 -
Vifa4g01020 1304 MobiDBLite consensus disorder prediction 939 986 - -
Vifa4g01020 1304 MobiDBLite consensus disorder prediction 1109 1131 - -
Vifa4g01020 1304 MobiDBLite consensus disorder prediction 717 868 - -
Vifa4g01020 1304 MobiDBLite consensus disorder prediction 939 994 - -
Vifa4g01020 1304 MobiDBLite consensus disorder prediction 850 868 - -
Vifa4g01020 1304 MobiDBLite consensus disorder prediction 396 494 - -
Vifa4g01020 1304 FunFam PAP/OAS1 substrate-binding domain superfamily 52 161 - -
Vifa4g01020 1304 MobiDBLite consensus disorder prediction 1092 1197 - -
Vifa4g01020 1304 MobiDBLite consensus disorder prediction 810 836 - -
Vifa4g01020 1304 MobiDBLite consensus disorder prediction 426 493 - -
Vifa4g01020 1304 MobiDBLite consensus disorder prediction 776 806 - -
Vifa4g01020 1304 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 20 1294 - -
Vifa4g01020 1304 MobiDBLite consensus disorder prediction 1143 1175 - -
Vifa4g01020 1304 MobiDBLite consensus disorder prediction 409 425 - -
Vifa4g01020 1304 SUPERFAMILY PAP/OAS1 substrate-binding domain 182 353 - -
Vifa4g01020 1304 MobiDBLite consensus disorder prediction 1240 1304 - -
Vifa4g01020 1304 Gene3D - 162 358 - -
Vifa4g01020 1304 CDD NT_PAP_TUTase 59 166 - -
Vifa4g01020 1304 MobiDBLite consensus disorder prediction 1282 1304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01020 Vifa-Chr4 294772361 294778968 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01020 - - gmx:100809742 2000.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01020 4 294772361 294778968 Vifa4g01020 4 294772361 294778968 ECH