Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01006 ATGGAGGATTCAGCTAAGCTGAGGTTGGTGAGGTGTCCCAAATGTCAAAATGTTCTTCATGAGCAACCTAGTTATTCTGTTTACCAATGTGGTGGTTGTGGAACTATTCTTAGAGGGAAGGTTAGTAATGGTAATGGTAATGGAAATGGAAATGGTAGTTTGTGGGAGGGTTCAGATGAGGGACAGGGTGGAGGAGTTTTCGGTAAATCGGGAAATTCTTTTAGGAAAGATGTAGGCTTTTTGAGTGATGGTTCAGATGTTGATGTTAAGTCCAACGGTGGGTTCTCGAGGGAGGATCGAAGAGATTCAGAGAGATCGAATAAGGAACGTGAGAGGATTGTGAATCGTTCGGTTGATGGTAGTGAGAAAGGGGTTTTGGAGAGAGGATTTGATGTCAATGAAGGGGGTAAAGCGATAAGAAGGGAACAACATGAACCGGATTTTCAAGTTGGAGGGTCTAGTTTTCCGAGAAGAATGTCTAATTGGCCGAATGAGGAGAGAGTTGAGATGGAAGCATTTCGGAGAAACCAATCGGCTGATATGGAAAGTGTGAGATTTTCCACTTTGAATTATCCTGACGAGGGAACTTCGAGATTTTCTTATAATCACGGTGAACAATGGAGTAATTATGAAGAAATGGATGGTATGAGTAGGGTTCGGCACCTCGAGCAAGATCGAGCCGAGCTTCTAAAGAAGCTTGATGAGTTAACGAAGCAGCTGAGTAATTCTTCTGAAATGGTTAATAATCCTAAAGAAAAAGGTCAACCTGATTTAAAGACGGTTCCTCCGGATCCTCGCAGCAGCTCTGATACACGATTTCCAGACGGCCCTTCAGGGTTGAACCGGGCGACCCCGAGGCAATTCTTTGATCCTAGTAAACATGTGGCGGCTTCTCCTTATTACAATCATCATCGTGATCCATATGGTTATACAAGTGGTCATGAAATGGCCATGCACAACTTCCATCCTTCGATGCATAACCCGGGCTATATTCCCGGATATGGAGATCCGTTCGGATCACAAATGACAAGAGGTCCACATCCGTTATCCCGCCAATTTCCTCAACAATCGATGCATCCCTACTTTCCTGGCCGCTATGGTGATACCGGTCCAGATTCATATGAACAGTATGCACATAATCCTATTCCGCATCCGCCTTCTTGCTCTTGTTTTCATTGCTACAACAACAAAAGAAGAGGTTCAATGCCAGCGCCACCCGCTACGTTCCTTAACAACAGATTCCCTCATGCCGCAAATGATTCTATGTTATACCGTAACGAGATCCCAGGTGCAGTTACTCAACATGCTCAGAATAACTCTAGAACTGCTATTCCTGCTGCAAGTTCTTATGAAAAGCAAGTACATACAAGATTGGTTAGTGACATCGATTCAGAGAGGGGAGGATTTTCTGCAAGTCGTTCTCAAAATGCAATGACAGCTAATGGTAGTCAGCGGTGCCGTCCGATAGCTGGTGGTTCTCCTTTCATCACATGTCATAATTGTTTTGAACTACTGCAACTTCCTAAAAATGTACTTGTTAAGGTGAAAAGTCGTAAGCAGAAAATGCGATGCGGAGCTTGTTCTTCAGAAATAAATATTTCTATCATCAATAAGAAGCTAGTTACATCTCATACGGTAATGGAGGAAAACACTGCAAGGATTGGGGATACCTCTAACGAGGTTGTGAATAGCCGTGTATCATATTCTCATGGTCATGTGAACACAAACGGTGTTAACTTCTCGTCGGACGATTATTCTGGTTATGATTTTCAGTCACTAGATAGAGGATCGCCTGCCGTGGCTTCTGACCCAAGCTTGAACTCTAGAAAGCTGCAGGAGATGCAAAGTTTCCATTCTTCATCTCCGAGCATCTCGGAAGACGAAAATATTTCAGAAGTTATGGCTGCACCAAGTGAAACCACTAAATCCATTCAGCCATCTAAAGCCTCAGTGTCTCCTCCACCTGCCGCCGGCTCACCACTCCAAGAGTATCTTGATTATTCTAGTAACAACCATGCAGTGAATCGGTTTGGAAAAGGCAACCAAAGTGGTCGCTCAGAACAAGAGAAAGTGGCGAAACTAGAAAAGAATACATCGAGGCAAAATTCTGTGAAAGAGGTAGTGCTTGCATCTGAGATGGATGTCATCGACTATTCCAACTCCGGGATCTCACAGGATACTAGCCAAGAACACGACCGCACAAGATCTAGCAAAGGAGGTGATTCGTTTTTCGCAAACATTTTCAAGAAAGGCTCCAGGGGTTCCTCCCTAACTGACAAAAGTGATGATAGTGAAAAATGTTTTGTTACCGTTAATGGACAACCCTTATCAGATCGTGTGGTGAAGAAGGCTGAAAAGATCGCCGGTCCAATCCAGCCAGGAAATTACTGGTATGATTCTCGGGCTGGATTTTGGGGTGTCATCGGCGGAGCGTGTCTTGGAATTATCCCGCCATTCATAGAAGAGTTCAATTATCCTATTCCTGATAAATGTGCCGGTGGAAACACCGATGTTTATGTAAACGGGAGAGAGCTTCACCAAAAAGACTTAGATTTGCTTTCTCGTAGAGGACTTCCAAATGAAAACGATAGATCATATATCGTTGAAATTTCCGGGAGAGTATTGGATGTAGACACAGGCGAAGAGCTAGATGGCCTCGGCAAACTTGCACCAACGGTGGAGAAAGCAAAGCATGGATTTGGCATGAAAGTACCAAGATCAGCAGCTGCATAA 2733 0.4402 MEDSAKLRLVRCPKCQNVLHEQPSYSVYQCGGCGTILRGKVSNGNGNGNGNGSLWEGSDEGQGGGVFGKSGNSFRKDVGFLSDGSDVDVKSNGGFSREDRRDSERSNKERERIVNRSVDGSEKGVLERGFDVNEGGKAIRREQHEPDFQVGGSSFPRRMSNWPNEERVEMEAFRRNQSADMESVRFSTLNYPDEGTSRFSYNHGEQWSNYEEMDGMSRVRHLEQDRAELLKKLDELTKQLSNSSEMVNNPKEKGQPDLKTVPPDPRSSSDTRFPDGPSGLNRATPRQFFDPSKHVAASPYYNHHRDPYGYTSGHEMAMHNFHPSMHNPGYIPGYGDPFGSQMTRGPHPLSRQFPQQSMHPYFPGRYGDTGPDSYEQYAHNPIPHPPSCSCFHCYNNKRRGSMPAPPATFLNNRFPHAANDSMLYRNEIPGAVTQHAQNNSRTAIPAASSYEKQVHTRLVSDIDSERGGFSASRSQNAMTANGSQRCRPIAGGSPFITCHNCFELLQLPKNVLVKVKSRKQKMRCGACSSEINISIINKKLVTSHTVMEENTARIGDTSNEVVNSRVSYSHGHVNTNGVNFSSDDYSGYDFQSLDRGSPAVASDPSLNSRKLQEMQSFHSSSPSISEDENISEVMAAPSETTKSIQPSKASVSPPPAAGSPLQEYLDYSSNNHAVNRFGKGNQSGRSEQEKVAKLEKNTSRQNSVKEVVLASEMDVIDYSNSGISQDTSQEHDRTRSSKGGDSFFANIFKKGSRGSSLTDKSDDSEKCFVTVNGQPLSDRVVKKAEKIAGPIQPGNYWYDSRAGFWGVIGGACLGIIPPFIEEFNYPIPDKCAGGNTDVYVNGRELHQKDLDLLSRRGLPNENDRSYIVEISGRVLDVDTGEELDGLGKLAPTVEKAKHGFGMKVPRSAAA 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01006 910 MobiDBLite consensus disorder prediction 92 116 - -
Vifa4g01006 910 Pfam Probable zinc-ribbon domain 490 535 IPR021480 -
Vifa4g01006 910 Coils Coil 219 246 - -
Vifa4g01006 910 MobiDBLite consensus disorder prediction 676 699 - -
Vifa4g01006 910 MobiDBLite consensus disorder prediction 594 662 - -
Vifa4g01006 910 MobiDBLite consensus disorder prediction 81 116 - -
Vifa4g01006 910 MobiDBLite consensus disorder prediction 720 740 - -
Vifa4g01006 910 MobiDBLite consensus disorder prediction 241 289 - -
Vifa4g01006 910 MobiDBLite consensus disorder prediction 48 69 - -
Vifa4g01006 910 MobiDBLite consensus disorder prediction 601 652 - -
Vifa4g01006 910 PANTHER EXTRA-LARGE G-PROTEIN-LIKE 1 901 IPR040244 GO:1900150
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01006 Vifa-Chr4 291488387 291491917 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01006 - - aprc:113849738 1236.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01006 4 291488387 291491917 Vifa4g01006 4 291488387 291491917 ECH