Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00993 ATGGCAGCTTTCGACCACTTCGGAGACATGTACGATGTTGCACTCAAACCACGTTTGCTCAACACTCTCATCAGCGACTACCTCCCTACCGTCGATCATCCCTTTTCCAACCCTTCCGAGCTCTCCAAAGTTGTCTCTTTGATCAAAACGCATTCTCTCCTATCTGAGGATGTAACAGATTCCATGGAGAGTAAACAAATTAAAGCTTGGAAAGTGTCTGTTACTTCATGGGTCGATCGTGTTTTGCTCCTCCTTTCTAGCCATTCGCCTGATAAGCGATGGGCAGGAATATCTTTGCTAGGGGTTACTTGTGAAGAGTGCAATTCTGATCGTTTCCAAGAATCTTACATTGTGTGGTTTCAGAAGTTGCTGACTTCTCTACAGTCGCCGGAAGATTCTCATATAGTGAGGGTGGCTGCTTGTGCTTCCATATCTGATCTGCTTGCAAGGTTAAGTGGATTTCCCAAGCTCAAGAAAGATGGGTCTGCCTCTGCTGTAAAAGTTGTTCAGCCTGTTCTAAAGATGTTACATGATGACAACTCAGAGGAAGTATGGGAAGCTGCAATTCATGTGATATGTACCTTGATAACTTCATTCCCATTTTCTATTCAGCGTCATTATGATAGTGTTGAATCTGCTATTGCTGTTAAACTTGTGTCTGCAGGATGCAGTCATGATATGATGAAGAAACTTGCACATTGCCTAGCATTGCTTCCAAAATCAAAAGGAGATGAAGAAAGCTGGTCTGTGATGTTGCAGACAATTTTGATTTTAATAAATGATCAATTAAATTTAAAGTTTGAAGGTCTAGAAGAAGATTACATCCGAAAAGAGTTCAATGGATTGTTGATTCTGCCCGGGAAGCAACCTCCACCACCTTTAGGAGGCCATGTATCCACAAAAGAAGCTAGTGGCAACCCAACAAAGAGGTCTAAACAATCACGAACGTCTAGCGTCTCTACACTTATGTCTAGCTGTTGCATGCTGCTCACAAATGCTTATCAAGTTAAGGTGAATGTACCTGTTCGCCTATTATTGGTCCTTGTTGAGAGAATTCTGATGGTAAATGGCGCTTTGCCAGAAATGTCGTTGCCATTCATGACCGCCAGACAGCAGGAAAACATTTGTTCAGAACTTCCAGTATTGCATATGTGTAGCCTGGAATTGCTTACAGCTATTATAAAGGCTACAGGCAGTCAACTATTACCACATGCTGCCTCTATTGTACGTTTGATTACAAAGTACTTCAAAACATGTGAGCTGCCAGAAATAAGGATTAAGGTTTATTCAGTTGCAAAGATTCTGCTCATTTCCATGGGTGTTGGAATGGCTTTATGCTTGTCAAAGGAAGTTGTCGATAATGCCATTGCTGATTTGAGCACCATAGAGAAGAAGAATGTAGGCATGCCAAATGGTTCTAATACTGACGTCTCCCCCGCAGCGCTGCAACCAGCAAGTAATAGAAAAAGGAAGCATAGCAGTACAAATGGATCCCTTCAGGAAAATGAGGCAGGTGGTGTTTTAGGAGTAGAAATTCTTAAGAAATGTCGGGTGGCTCCAATTTCTCTGAGGATAGCTGCACTTGAGGCATTAGAGGCTCTTCTTACTGTGGCTGGCGCTTTAAAATCACAACAGTGGAGATCCAAAGTCGATAGTCTTTTGATAACCATAGCAACGGATTCTTTCAGAGAAGGTTCATCAAGTGAAGAAATAAATGTGTTTCAGAAAAAGGATCCTGCTGCAACTGCCACAGATTTGCAGCTTGCTGCATTGCGTGCTCTTTTGGCGTCTTTTCTTTCTGCGTCGCGGCCCCCATATTTATCACAGGGCCTTGAACTTTTTCGAAGAGGAAAGCAACAAACTGGAACAAAGCTTGCTGAGTTCTGTGCTCATGCTATGTTAACCTTGGAAGTGCTTATACATCCCAGGGCACTTCCTTTAGTCGACTACGTCCCTCCAAACAACGATACTTTTCGTGAAACTCAGTTCAGTTACCGAGACGAATATGTTAGCCGAAACAACAACACTCAATTTGGTTTTCCTCAAGCAGAACCTCCGGGCTCCCGTGAAAATCAATTTACCGACTATTTGGCAAATGGGGATGATGAGATGGGTAGGTTATGGACCGAAAATACAAAAGAAACCAAAGAGTCTTCTGAAGTGGCCACACCCCTGCCTTCCAGTGCCAACATCCAAGAGAGGAGTGAGATGTTACCCGAGTCTGCCACATGTGCAGATGTTGAGATGAGAACCGCCGATAACGATAGCGAAACCACATTCAAGTCAGATCATCCTGGAGAATCTGTAGCACAATTTCAAGAACCCGTTCCTAGCCAAACAAGCAATGCCACCGTCATTGACATTCGCAGGGTTGTTAGAGACAGCACTCTACCTCATAATGAAGCCAATGATTTGGATTTAGCTTCCAAGAGCAAAAGTCCAGTGCAGACATCAGACACTAATTTGGTTCAGCAATTTGCAGTTAAGAAGTTTGGCGATTCAGTGGACGATGAATATGAACCTTTTCCTGAAATTGTGGATGGAGATCCCGATTCTGATTCCGGATCCGAATAA 2574 0.4316 MAAFDHFGDMYDVALKPRLLNTLISDYLPTVDHPFSNPSELSKVVSLIKTHSLLSEDVTDSMESKQIKAWKVSVTSWVDRVLLLLSSHSPDKRWAGISLLGVTCEECNSDRFQESYIVWFQKLLTSLQSPEDSHIVRVAACASISDLLARLSGFPKLKKDGSASAVKVVQPVLKMLHDDNSEEVWEAAIHVICTLITSFPFSIQRHYDSVESAIAVKLVSAGCSHDMMKKLAHCLALLPKSKGDEESWSVMLQTILILINDQLNLKFEGLEEDYIRKEFNGLLILPGKQPPPPLGGHVSTKEASGNPTKRSKQSRTSSVSTLMSSCCMLLTNAYQVKVNVPVRLLLVLVERILMVNGALPEMSLPFMTARQQENICSELPVLHMCSLELLTAIIKATGSQLLPHAASIVRLITKYFKTCELPEIRIKVYSVAKILLISMGVGMALCLSKEVVDNAIADLSTIEKKNVGMPNGSNTDVSPAALQPASNRKRKHSSTNGSLQENEAGGVLGVEILKKCRVAPISLRIAALEALEALLTVAGALKSQQWRSKVDSLLITIATDSFREGSSSEEINVFQKKDPAATATDLQLAALRALLASFLSASRPPYLSQGLELFRRGKQQTGTKLAEFCAHAMLTLEVLIHPRALPLVDYVPPNNDTFRETQFSYRDEYVSRNNNTQFGFPQAEPPGSRENQFTDYLANGDDEMGRLWTENTKETKESSEVATPLPSSANIQERSEMLPESATCADVEMRTADNDSETTFKSDHPGESVAQFQEPVPSQTSNATVIDIRRVVRDSTLPHNEANDLDLASKSKSPVQTSDTNLVQQFAVKKFGDSVDDEYEPFPEIVDGDPDSDSGSE 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00993 857 MobiDBLite consensus disorder prediction 712 782 - -
Vifa4g00993 857 MobiDBLite consensus disorder prediction 289 317 - -
Vifa4g00993 857 PANTHER PROLINE-, GLUTAMIC ACID- AND LEUCINE-RICH PROTEIN 1 7 853 - -
Vifa4g00993 857 MobiDBLite consensus disorder prediction 718 737 - -
Vifa4g00993 857 Pfam rRNA processing/ribosome biogenesis 18 221 IPR012583 -
Vifa4g00993 857 MobiDBLite consensus disorder prediction 467 500 - -
Vifa4g00993 857 MobiDBLite consensus disorder prediction 838 857 - -
Vifa4g00993 857 SUPERFAMILY ARM repeat 75 636 IPR016024 -
Vifa4g00993 857 MobiDBLite consensus disorder prediction 801 821 - -
Vifa4g00993 857 MobiDBLite consensus disorder prediction 807 821 - -
Vifa4g00993 857 MobiDBLite consensus disorder prediction 301 317 - -
Vifa4g00993 857 Gene3D - 53 641 IPR011989 -
Vifa4g00993 857 MobiDBLite consensus disorder prediction 833 857 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00993 - - aprc:113850109 1040.02