Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00991 ATGCCGACCGGCGACATCCGCTACACCTCCCCACCAACGGCAACCAACAACTCCTCCCCTATCGTTGCCTTCGAGGACGAAGTTTGGCTATGGTCCCAAATCAAAGCCGAAGCTCGCCGTGACGCCGAGTCGGAACCGGCGCTGGCGAGTTATCTATACTCGACGATTCTCTCCCACTCCTCGCTTGAACGGTCGCTGTCGTTTCATCTAGGGAATAAGCTTTGTTCGTCGACGCTTCTTTCGACGCTTCTGTATGATTTGTTTCTCAATGCTTTTGCTACTGACCCGTCGCTGAGTTTGGCGGCTGTGGCTGATCTTCGTGCTTACCGGGAACGGGACCCTGCGTGTATCTCTTACTCTCACTGTTTGCTCAATTACAAAGGATTCCTTGCTTGCCAGGCGCACCGTGTGTCTCACTTATTGTGGAGGCAGGCTCGGCGTCCGTTAGCGTTGGCGCTACATTCTCGAGTTGCCGATGTGTTTGCAGTGGATATCCACCCGGCAGCAAGAATTGGGAAAGGAGTTTTGTTTGACCATGCCACGGGTGTGGTGGTGGGCGAGACTGCGGTGATTGGAAACAACGTGTCGATTTTGCATCATGTGACATTGGGTGGGACTGGAAAGGCTGGTGGGGATAGGCATCCCAAGATTGGTGATGGGGTGCTCATTGGTGCTGGTGCTACTATTTTGGGCAATGTTAAGATTGGGGAAGGTGCTAAGATAGGTGCTGGGTCTGTTGTTTTGATTGATGTGCCGCCACGGACTACTGCTGTTGGGAACCCGGCGAGATTGGTTGGTGGTAAAGAGAAGCCATCTAAGCTTGAGGATGTGCCTGGTGAATCCATGGACCATACTTCCTTTATCTCTGAGTGGTCTGATTATATCATTTGA 891 0.523 MPTGDIRYTSPPTATNNSSPIVAFEDEVWLWSQIKAEARRDAESEPALASYLYSTILSHSSLERSLSFHLGNKLCSSTLLSTLLYDLFLNAFATDPSLSLAAVADLRAYRERDPACISYSHCLLNYKGFLACQAHRVSHLLWRQARRPLALALHSRVADVFAVDIHPAARIGKGVLFDHATGVVVGETAVIGNNVSILHHVTLGGTGKAGGDRHPKIGDGVLIGAGATILGNVKIGEGAKIGAGSVVLIDVPPRTTAVGNPARLVGGKEKPSKLEDVPGESMDHTSFISEWSDYII 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00991 296 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 223 251 IPR018357 GO:0016740
Vifa4g00991 296 Pfam Hexapeptide repeat of succinyl-transferase 181 197 IPR001451 -
Vifa4g00991 296 FunFam Serine acetyltransferase 164 289 - -
Vifa4g00991 296 PANTHER SERINE ACETYLTRANSFERASE 19 296 - -
Vifa4g00991 296 Pfam Serine acetyltransferase, N-terminal 30 134 IPR010493 GO:0005737|GO:0006535|GO:0009001
Vifa4g00991 296 SUPERFAMILY Trimeric LpxA-like enzymes 25 266 IPR011004 -
Vifa4g00991 296 CDD LbH_SAT 161 261 IPR045304 -
Vifa4g00991 296 Gene3D serine acetyltransferase, domain 1 12 163 IPR042122 -
Vifa4g00991 296 NCBIfam serine O-acetyltransferase 104 263 IPR005881 GO:0005737|GO:0006535|GO:0009001
Vifa4g00991 296 SMART SATase_N_2_a 30 134 IPR010493 GO:0005737|GO:0006535|GO:0009001
Vifa4g00991 296 Pfam Bacterial transferase hexapeptide (six repeats) 214 247 IPR001451 -
Vifa4g00991 296 Gene3D Hexapeptide repeat proteins 164 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00991 Vifa-Chr4 285831607 285833703 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00991 30 284 Miscellaneous Gene Families AT2G17640 54.510 2.69e-90 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00991 K00640 - gmx:547632 515.768