Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00988 ATGAAGGCACCTATGCGACTCCTTTTCATAATTACCTTTCTTGGTTCATTCCTCCATGCAAGGCCAGAAACTGACTCGTGTACCAGAAATCTGAGTCTCCAAGTTCATCTCCCTTTTGATACAACCAACCTTCACTGCCTCTCTGTATGGGATGCTCAAGGTTTCATCCTCAGATATGTTCAGACTTCTGCAAACATTTGGAGCTTTATTCTCTCAACACCAGACACAAATTCTTACATATCTATGGGGTTTTCAGCCAGCGGCAGCATGGTGGGTTCAAGTGCAATTGTGGGGTGGGTGTCATATAGAGGAGCCAGTGGAGGGATAAAGCAGTATTACCTTGGTGGAGTTACCTCAAATCAGTTAGAAACTACCGAACCTCTGTCCTGGTTGATACTTGCCACTGGATCCACTGGTATATTCCCTGCAGCACCAGATTATTCACTAACAAAACACCTAGACAAGTTTTCCACAAGAATAGATTACTCAAAAGCAAATCATGGGAGTTCACAATTGAATGGAAGTTCTTCTTCACAAGGAGATGTAAGTAGTTCACAAGGTGACTCATGTAGCTCCAAGCTAAACCTCAATGTCCCTCTCCTCTTTGACACAACCAAGCTCAATTGTCTTCCTGTTTGGAATGCTCAAGGATTCATCCTAAGATATTCTCAAACTTCTCCAAACATATGGAGCTTCATTCTCTCAGCACCAAACCAAAATTATTACATATCAATAGGGTTCTCTTCCAATGGAGGCATGGTAGGTTCAAGTGCAATTGTAGGGTGGATCTCATCCAATGGTACTAGTGGAGGTATGAAACAATATTATCTATCAGGGTATGGACCAAACCAAGTGGTTCCAAATAGAGGCAACTTACCAATTATTAACAATTCAACTTTGATCACATTGCAATCATCACGTTTGTACATGGCATTCCAGTTACAGACTAATCATCCTCTGTCCCGGTTGATCTATGCCATTGGACCAAATGGCGTTTTTCCTGCAGCTCCAAGTTTTGGTCTAATGCAGCACCAAGACAAAGTTTCAATTACAGTCAATTATGCTACAGGTTCAAGTGCATTAGGAAACTTAAATATGAACCTAAAAAGAAGCCATGGGGTGTTGAATATATTGGGATGGGGAATCTTTATCATAATGGGAGCAATAGTTGCTCGTTACTTCAAGGATTGGGATCCATTTTGGTTTAATTTTCATGTTTCAGTTCAATCATTAGGTTTTGTTCTTGGCCTAATTGGTGTAATTAGTGGACTAATCCTTAATAATCAACTTCATGTTGATTTTAATCTTCACAAAGCACTTGGAATCATCATTCTTGTTCTTGCTTGCCTCCAGATACTGGCTTTTGTTGCTAGACCAAAAAAGGGATCAAAAGTGAGAAAGCATTGGAATCTATATCATCATAACATAGGGAGAATAGTAATTATATTATCCATAGCCAACATTTTCTATGGAATCCATTTAGGAAATGAAGGAAGTGGATGGATGGTAGGTTATGGAATTGTGCTTGCAATATTAATCTCTATTGCGGTTATTTTTGAAATTGGACTTTGGAGTAAACATTAA 1584 0.3939 MKAPMRLLFIITFLGSFLHARPETDSCTRNLSLQVHLPFDTTNLHCLSVWDAQGFILRYVQTSANIWSFILSTPDTNSYISMGFSASGSMVGSSAIVGWVSYRGASGGIKQYYLGGVTSNQLETTEPLSWLILATGSTGIFPAAPDYSLTKHLDKFSTRIDYSKANHGSSQLNGSSSSQGDVSSSQGDSCSSKLNLNVPLLFDTTKLNCLPVWNAQGFILRYSQTSPNIWSFILSAPNQNYYISIGFSSNGGMVGSSAIVGWISSNGTSGGMKQYYLSGYGPNQVVPNRGNLPIINNSTLITLQSSRLYMAFQLQTNHPLSRLIYAIGPNGVFPAAPSFGLMQHQDKVSITVNYATGSSALGNLNMNLKRSHGVLNILGWGIFIIMGAIVARYFKDWDPFWFNFHVSVQSLGFVLGLIGVISGLILNNQLHVDFNLHKALGIIILVLACLQILAFVARPKKGSKVRKHWNLYHHNIGRIVIILSIANIFYGIHLGNEGSGWMVGYGIVLAILISIAVIFEIGLWSKH 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00988 527 CDD DOMON_DOH 216 349 IPR045266 -
Vifa4g00988 527 ProSiteProfiles DOMON domain profile. 216 328 IPR005018 -
Vifa4g00988 527 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 8 129 - -
Vifa4g00988 527 SMART DOMON_3 79 136 IPR005018 -
Vifa4g00988 527 SMART DOMON_3 242 328 IPR005018 -
Vifa4g00988 527 Gene3D - 347 525 - -
Vifa4g00988 527 ProSiteProfiles Cytochrome b561 domain profile. 335 527 IPR006593 -
Vifa4g00988 527 Pfam DOMON domain 232 285 - -
Vifa4g00988 527 Pfam Eukaryotic cytochrome b561 372 492 IPR006593 -
Vifa4g00988 527 ProSiteProfiles DOMON domain profile. 53 165 IPR005018 -
Vifa4g00988 527 CDD Cyt_b561_FRRS1_like 349 521 - -
Vifa4g00988 527 CDD DOMON_DOH 45 116 IPR045266 -
Vifa4g00988 527 MobiDBLite consensus disorder prediction 167 186 - -
Vifa4g00988 527 SMART 561_7 371 492 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00988 Vifa-Chr4 285631708 285637619 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00988 - - lang:109356980 798.505