Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00987 ATGTCTTCTCCTTTTCCACGCCTCCTATGCCTATTCCTGGCTCTCGTCGTCCTCGCCGGAACACCTTCTCCGGCTGATTCTGCCGATGAGCTGGAGCGTGGAGGAGGCGGAGGCCACCGTCAGAGAGAGTTTGATTATTTCGCTTTGGCGTTACAATGGCCTGGTACTTATTGTCAACGCACGCGCTATTGTTGTTCCTCTAATGCTTGTTGCAGAGGCTCCAATTCTCCGGCAATATTCACCATACATGGACTCTGGCCTGACTATAATGACGGAACGTGGCCAGCATGTTGCACCAAATCCCGTTTTGATCCAAAAGAGATATCTACATTGAATAGTGCTTTAGAGCAATATTGGCCATCATTGAGCTGCAGCTCACCATCTTCATGCAGTGGCGGAAAAGAGAAGCATGGCACGTGCTCATCTCCCGTGTTTGACAATGAATATGACTATTTCTTGACAACACTTAATGTCTATTTCAAATATAATGTTACGCAAGTTCTAAATGAAGCTGGATATGTTCCGTCAAACACAGAAAAGTATCCCCTCGGAGGCATTATCTCTGCCATTGAGAATGCTTTCCATGCATCTCCTTTAATAGTTTGCTCAAAAGGTTCAGTTGAGGAGCTTCGTTTATGCTTCTATAAGGACTTCACGCCACGTGATTGTGCTATTAAACCAGACGCTAAAATTGATATGGTTACTTCAAAAGGATCATGTCCTAAATATGTTAGCCTGCCAGAATCAATAGGGCATGATGGACTTCAGAGTCGGGTGTCTAAAGATGCATCTCTATAG 798 0.4486 MSSPFPRLLCLFLALVVLAGTPSPADSADELERGGGGGHRQREFDYFALALQWPGTYCQRTRYCCSSNACCRGSNSPAIFTIHGLWPDYNDGTWPACCTKSRFDPKEISTLNSALEQYWPSLSCSSPSSCSGGKEKHGTCSSPVFDNEYDYFLTTLNVYFKYNVTQVLNEAGYVPSNTEKYPLGGIISAIENAFHASPLIVCSKGSVEELRLCFYKDFTPRDCAIKPDAKIDMVTSKGSCPKYVSLPESIGHDGLQSRVSKDASL 265
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00987 265 ProSitePatterns Ribonuclease T2 family histidine active site 1. 80 87 IPR018188 GO:0003723|GO:0033897
Vifa4g00987 265 CDD RNase_T2_euk 44 242 IPR033697 -
Vifa4g00987 265 SUPERFAMILY Ribonuclease Rh-like 43 247 IPR036430 GO:0003723|GO:0033897
Vifa4g00987 265 FunFam Ribonuclease T2 40 251 - -
Vifa4g00987 265 Pfam Ribonuclease T2 family 44 223 IPR001568 GO:0003723|GO:0033897
Vifa4g00987 265 PANTHER RIBONUCLEASE T2 21 242 IPR001568 GO:0003723|GO:0033897
Vifa4g00987 265 Gene3D - 40 250 IPR036430 GO:0003723|GO:0033897
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vifa4g00987 Vifa-Chr4 285626648 285631065 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00987 K01166 - gmx:100789614 390.578