Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00983 ATGAGTACCTTTAAGGTGTCCCTTAATTTGTATGCATTCTTTAACCTCTTAATGATATCTTCATTCATCGGTTCAAGTTATTCTGCATGTGATATTAAGGGAATATTCAACTTTGGTGATTCAAATTCAGATACAGGTGGATTTGATTCAGCTTTTCCTGCACAACCTGGTCCCTATGGAATGACTTATTTCAAAAGGCCAGTTGGACGTTCTTCTGATGGGAGACTCATTGTGGATTTTTTAGCTGAGGCTCTTGGATTGCCCTATTTGAGTCCATATTTGCAATCAATTGGATCAGATTATACACATGGTGCTAACTTTGCAACATCAGCTTCTACTGTACTTTTACCAACTACTTCTTTCTTTGTAAGTGGGCTTAGCCCTTTTTCCCTAACAATACAACTAAGGCAAATGGAACAATTCAGAGCTAAAGTTCATGATTTTCATAAAAGAGATCCATTGAAACCATCTGGTTGTGATTCAAGAATCAACATTCCTTCACCTGATATATTTGGAAAATCTATTTACATGTTCTATATTGGTCAAAATGACTTCACTTCAAAAATAGCAGCTACTGGTGGTATTGGTGGATTGAAGAACTCCCTTCCTGAAATTGTCTTGCAAATTTCTTCTGCCATTAAGGAGTTATATGCACAAGGAGGACGTACATTTATGGTATTAAATCTTGGTCCAGTGGGATGCTATCCTGGATATTTGGTGGAGCTTCCTCATATTAATTCCGACATAGATGAACATGGATGCATGATTTCTTACAACAATGCTGTAGATGATTACAACAAACTATTGAAAGAGTCATTGACTCAAACTAGAGAAGCTTTACCAGGTGTTTATCTCATTTATGTGGATACCAACTCTGCCCTAATGGAACTCTTCCACCACCCTACATCTTATGGACTGAAGTATAGTACCAAAGCATGTTGTGGTCATGGAGATGGAGATTACAATTTTGATCCTAAAGCTTTGTGTGGCAATATGCTTGCAAGTGCATGTGAAGATCCTCAAAACTATGTGAGTTGGGATGGTATCCATTTCACAGAATCTGCAAACAAGATTATTGCTAAGGCTATTCTAAATGGCTCTCTTTCTGATCCTCCATTTCCTCTTCATAAATTGTGTGATCTTCAACCTATTGATTGA 1158 0.3731 MSTFKVSLNLYAFFNLLMISSFIGSSYSACDIKGIFNFGDSNSDTGGFDSAFPAQPGPYGMTYFKRPVGRSSDGRLIVDFLAEALGLPYLSPYLQSIGSDYTHGANFATSASTVLLPTTSFFVSGLSPFSLTIQLRQMEQFRAKVHDFHKRDPLKPSGCDSRINIPSPDIFGKSIYMFYIGQNDFTSKIAATGGIGGLKNSLPEIVLQISSAIKELYAQGGRTFMVLNLGPVGCYPGYLVELPHINSDIDEHGCMISYNNAVDDYNKLLKESLTQTREALPGVYLIYVDTNSALMELFHHPTSYGLKYSTKACCGHGDGDYNFDPKALCGNMLASACEDPQNYVSWDGIHFTESANKIIAKAILNGSLSDPPFPLHKLCDLQPID 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00983 385 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 18 371 - -
Vifa4g00983 385 Gene3D SGNH hydrolase 24 367 IPR036514 -
Vifa4g00983 385 SUPERFAMILY SGNH hydrolase 35 365 - -
Vifa4g00983 385 Pfam GDSL-like Lipase/Acylhydrolase 35 363 IPR001087 GO:0016788
Vifa4g00983 385 CDD SGNH_plant_lipase_like 35 367 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00983 Vifa-Chr4 285002594 285004320 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00983 32 374 Acyl Lipid Metabolism Gene Families AT4G10950 26.912 3.57e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00983 - - aprc:113850566 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00983 4 285002594 285004320 Vifa4g00983 4 285002594 285004320 ECH