Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00973 ATGATTCCTGCATACAGAAACATGGATTCATACCCATTTCACAGAAATCAAGTACCATTTCCTCTTTACTATCATCCCGCAATGGAATCTGTTCCCTCACAAATGGCCAAATCACCCTTTTCTTATGAACAACCTTGGCCTTATGCTAGCAGTTATGCACCACATTTCTGCTATAGTCACGTACCTTGTTATCCTCATGTTCCTTCTTCATCACCAATGTTTTATCCCGGTGGTGGTCCTTCTTTCTTTGGTCCTTATTCTCCACAATCACATTATGGTATGGAGGTTCCGAGATATGAATATGATAAATGTGTGTCAAGGGATCATCGTTGTTGCGGTTGTCCTAATCATTCATGCAACCAAAAGGAAGATAGAACTGTGAGTATTGAAGAAAGAAAACCTAATCTTGGTAAAAAAGAGAATGATGGTATCGAGTTTAGAAATTTCTCACACCCTTTGGTTTGGACTCCACCAGAGTACAATGGTAACAGACAAATGAAAGTTCCTACTGGGGTGGATGAACAAGATAGAATGTCACATGATAAGAAACTTACGGGGGTGGAGGGTTTCAATGCGGATGCTCAGCGAGCAGTTGAGCCGAGATTATGGAATGGATGGTTACCATTTGATGTAAAGGATGTGCCGAACATGTTTTGCGATGGAGATGGGATAAGAAGTATTAAGAAGGAAGCTGATGACAATGTGATGGAGTATGGAAATGGAAAAACTGATCAAAAGCATCAGAGTGAACAACAAAAGAGATCTGAATTTCCGTTTCCATTTATTTGGTTTCCCTCTTACAATAATCAAGAGGATGGTGGAAGGACAAACAATCAGAAAAGCTATTCAGCTAAGGAAGGTGTTGAGGAGGTGCCTCATACATTCAAATCTGTTCCTGTGAAGTCTTGTGCTGATGAAGGTGTTACAAAAAGGGCTAATTCAAATGGTGTTGAGTCCAGAGATAGAAGTGCTTTTGATGTTACAGAGAAAGTGATTAACCAAAGAAATATTCCTGTGAAGCAGATTGAGTCGAATCATGTGAAAAACAACTCCATGGAAAGTGAAAAGAGAGAAATGAATGTCCCTGAAGAAAATGTAGCAATAAAAGACTCGCAATCGGTCAACAAACAACGGTCAACTTCTCCAACTTCTCCAACTAAGGGATCTAAGTTGCCTCCTGTTTGTCTAAGAGTTGATCCATTACCAAGGAAGAAAAATGTCAATGGGAAATCAAGGTCATTGAGTCCACCTGCTTTAAGGGAACGTTCCAAAGCAATTGCTTGTGAAACAAGCAACACTCCTTTGGACAGCATGACAGACAAGACTGAGCTGTGTTCACCTATTCAGGTATCCCAAAACAAGACTAACGAAAACATGGCTGCAAACTCAAAAATTCACGAAGGTGGTAAAAGAGAAAAACGAGTTTTGTCGAATGCAGATGCTGCTGTTGTGATACAGACTGTTTATCGCGGTTATCTAGTAAGAAAATCAGAGCCTATAAAGAAACTGAGGCAGATAGCTGAAGTCACTAAAGAGGTGACTTATGTTAAGGATCGTATTGAGGCCTTTGAAGGTTCTTCTAATCTTCAAATTGATGACAAGGAGAAACTTGCCATTGGAGAGATCATAATGAGACTATTGCTGAAGTTGGATACTATACAGGGTTTGCATCCAAGTTTGAGGGAAATCAGAAAGTCACTGGCAAGAGAGCTTGTGACTTTGCAGGAAAAGCTTGATTCTATAGCGATGAAGAGTCCTTCTCAGCAGGAGATGCAGGAGTTAGATGCTAAAAAACACCTTGAAATATCTTCCCAGAATGTTCAAAATGGAGAACGTAACCAAGAGCAACAAGAAGAGAAAATGGCAACACAAAAAGATTCATCTGAAGGTATCAGTGATGGAAAACCTCAGGATCAGTTCTGCATGATGGATGTGGAAGGTGTAAATGAATCTCAGTCCTATGTTGGTTCTGGATCAGTTAATCTGGATATCAGCCCAGTTGTTTCTGTTGACGCGATGGATTCCACAAGTAATTTTTCCGATAAAATGGACGAGGAAATGGCATCGGAACTCATTGGCATTCCTATTGAGGTTGATAAACTCAATATGAATGCATTTAAAGAACTTCCTGTGGGAGTTATTGATGAAGATACCATTGAGGATTATGCAAGTGAAAGGGTAGATTCTGATATGGATGCCATGAAGGAGCTTCCAATGGGAGTGTTCGTTAAAGACGCTGCCACATCGGAAGAGACTAATACTGCGGAAAATCAGGTGTTCGTTAAAGAACTCCCAGTAGAAGTGCTTGATGAGAATTCAGAGAAATCTGAAAAAGAAAGATCCGAATATAGAGAAAAAGATACTGAACTAGAGCAGCCACTGGTTGAAGAAAAAGAAGGGGTGCAAAATGATACTAATTTACTAACTCTTGAGAATGAAGAACAAAATGATGTAGCAAACACCATGTTGAATGAAAATGAACCAAAAGAGAAGCTTGCACAGCAAGAAACACATCTTGATGTTCAAGGCAATGTTTCTGTAAAAACAAACAGTGGTGTTGATAAAAACACAGAAACTTGGGCCAAGGAGGAAACTGAACCATCTGTAGATTTATCTGTTACCAAGGATAATGCAGAGTTGAATGGTAACATGGTGTTATTGGAAGAGAATGAGAAGCTAAGGAAGATGATGAAGGAGTTACTTCAAGCTGGGAATGAACAGTTAAGTGTAATATCAAATTTAACTGGGAGAGTGAAAGATTTGGAGATGAAATTAGCCAAAAGTAGGAAGAGTAAGAAAATGAAGACAAAGAGACATAGATCAGTAACTTCCAAAGTGTCATGTGATAACTCTATTGAATAA 2862 0.3931 MIPAYRNMDSYPFHRNQVPFPLYYHPAMESVPSQMAKSPFSYEQPWPYASSYAPHFCYSHVPCYPHVPSSSPMFYPGGGPSFFGPYSPQSHYGMEVPRYEYDKCVSRDHRCCGCPNHSCNQKEDRTVSIEERKPNLGKKENDGIEFRNFSHPLVWTPPEYNGNRQMKVPTGVDEQDRMSHDKKLTGVEGFNADAQRAVEPRLWNGWLPFDVKDVPNMFCDGDGIRSIKKEADDNVMEYGNGKTDQKHQSEQQKRSEFPFPFIWFPSYNNQEDGGRTNNQKSYSAKEGVEEVPHTFKSVPVKSCADEGVTKRANSNGVESRDRSAFDVTEKVINQRNIPVKQIESNHVKNNSMESEKREMNVPEENVAIKDSQSVNKQRSTSPTSPTKGSKLPPVCLRVDPLPRKKNVNGKSRSLSPPALRERSKAIACETSNTPLDSMTDKTELCSPIQVSQNKTNENMAANSKIHEGGKREKRVLSNADAAVVIQTVYRGYLVRKSEPIKKLRQIAEVTKEVTYVKDRIEAFEGSSNLQIDDKEKLAIGEIIMRLLLKLDTIQGLHPSLREIRKSLARELVTLQEKLDSIAMKSPSQQEMQELDAKKHLEISSQNVQNGERNQEQQEEKMATQKDSSEGISDGKPQDQFCMMDVEGVNESQSYVGSGSVNLDISPVVSVDAMDSTSNFSDKMDEEMASELIGIPIEVDKLNMNAFKELPVGVIDEDTIEDYASERVDSDMDAMKELPMGVFVKDAATSEETNTAENQVFVKELPVEVLDENSEKSEKERSEYREKDTELEQPLVEEKEGVQNDTNLLTLENEEQNDVANTMLNENEPKEKLAQQETHLDVQGNVSVKTNSGVDKNTETWAKEETEPSVDLSVTKDNAELNGNMVLLEENEKLRKMMKELLQAGNEQLSVISNLTGRVKDLEMKLAKSRKSKKMKTKRHRSVTSKVSCDNSIE 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00973 953 SUPERFAMILY BAG domain 498 581 IPR036533 GO:0051087
Vifa4g00973 953 MobiDBLite consensus disorder prediction 606 638 - -
Vifa4g00973 953 ProSiteProfiles IQ motif profile. 478 507 IPR000048 GO:0005515
Vifa4g00973 953 Coils Coil 564 584 - -
Vifa4g00973 953 MobiDBLite consensus disorder prediction 343 423 - -
Vifa4g00973 953 MobiDBLite consensus disorder prediction 349 364 - -
Vifa4g00973 953 Coils Coil 600 620 - -
Vifa4g00973 953 SMART BAG_1 505 582 IPR003103 GO:0051087
Vifa4g00973 953 MobiDBLite consensus disorder prediction 770 791 - -
Vifa4g00973 953 MobiDBLite consensus disorder prediction 926 953 - -
Vifa4g00973 953 Coils Coil 911 931 - -
Vifa4g00973 953 FunFam BAG family molecular chaperone regulator 6 495 586 - -
Vifa4g00973 953 Gene3D BAG domain 493 587 IPR036533 GO:0051087
Vifa4g00973 953 MobiDBLite consensus disorder prediction 366 388 - -
Vifa4g00973 953 Pfam IQ calmodulin-binding motif 480 496 IPR000048 GO:0005515
Vifa4g00973 953 MobiDBLite consensus disorder prediction 267 288 - -
Vifa4g00973 953 Coils Coil 883 906 - -
Vifa4g00973 953 MobiDBLite consensus disorder prediction 269 284 - -
Vifa4g00973 953 ProSiteProfiles BAG domain profile. 505 582 IPR003103 GO:0051087
Vifa4g00973 953 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 65 940 IPR040400 -
Vifa4g00973 953 Coils Coil 766 786 - -
Vifa4g00973 953 Pfam BAG domain 506 580 IPR003103 GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00973 Vifa-Chr4 280902977 280905965 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00973 - - psat:127076014 1389.4