Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00957 ATGACAAAACCGAATGCTAATACAAAGTTAAAAAGATGGAGAAGTGTTTATTTTTTCATCTTTATAGCTGGTGCTATTGCTCTTCTCCTTTCGGGTGCTTCGATGTCGAAATTCTTCTCTTTGAAATCATTTCTTGATGTTGAGTCTTTCTACACTCATCTAACTCCTCCGGAGGAAACAGATAGGTATAATCGAAATGAAGTGTTAACAACTGTGCAAATTGTGATTCAAAAAATTCAAAAGGAGATTGAAAAACTTAGGGAAATGCATCGAGATCCTTCATCATCGTCTCCATCCGAAATTGTATTGAAACAAGGTGTTTTCCTTGCTGACATTTTAGGACTACTCGAGGCCTTGCATAGTGAAGTTCACAAGGGTAGTTTCATCGCTCATCCTTTGATGAAAGAAAAGAAACGGTTTGATAAACCGGCTAGTTACTTTCTAAGAGAAGAGATTCGAAAATATGTCAGAATCAAGCCTAACCGATTAGGAAAACAAAATTTTATGGGGGCGAACGCGACATTCACTAGCATAGGACATGCATGTTTTTCCATGAAGGAAGATTTAGAAGAGTACATGGATTATGACATTGGTGAAATATGCAATGATGATTGGAAACTAGCTCAAAAGCTTATGGTTCACGGATGCGATCCTCTACCGAGGAGAAGGTGTTTTTCGAGAGCACCTAAACTATACAACAAACCATTACCTATTAAAGATTCCATGTGGAAACTACCTGATGATAGAAATGTTAGATGGAGTCAATATAGGTGCAAGAACTTTACTTGTCTCGCAAGCAACAACAATGCTCGAAAGGGATTCTTCAAATGCGCGGATTGTTTCAATCTAACCCATCATGAGATGCCGAGATGGATAAGATTAGATGGTGATTCAACTTCGAATCAAACAAGCGAGGCTGATTTTTTTATAGATGATGTTCTTGGAATTAAGTTGGGAGAGATTAGAATTGGATTGGATTTTAGTGTTGGAACTGGAACTTTTGCTGCTAGAATGAAAGAATTCAATGTGACTATAGTTTCAGCAACTATTAATCTTGGTGCACCTTTTAGTGAAATGATAGCTCTTAGAGGACTTGTTCCTCTTTACTTGACTATAAATCAAAGGCTTCCATTTTTTGATAATACACTTGATTTGATTCACACAACAAGGTTTCTTGATGGTTGGATTGATTTTGTGCTTTTGGATTTTGTTTTGTATGATTGGGATAGAGTTTTGAGGCCAGGAGGGTTGCTTTGGATTGATGCATTTTTTTGCTTGAAGGAAGATTTGTATGATTACTTGCAAGCTTTCAAAATGTTGAGATATAAAAAGCATAAATGGATTGTTGTTCCAAAGATTGATAAGGATGATCAAGAGGTGTTCTTCTCGGCTGTTTTAGAGAAGCCTCCTAGACCATTTAGGTGA 1425 0.3691 MTKPNANTKLKRWRSVYFFIFIAGAIALLLSGASMSKFFSLKSFLDVESFYTHLTPPEETDRYNRNEVLTTVQIVIQKIQKEIEKLREMHRDPSSSSPSEIVLKQGVFLADILGLLEALHSEVHKGSFIAHPLMKEKKRFDKPASYFLREEIRKYVRIKPNRLGKQNFMGANATFTSIGHACFSMKEDLEEYMDYDIGEICNDDWKLAQKLMVHGCDPLPRRRCFSRAPKLYNKPLPIKDSMWKLPDDRNVRWSQYRCKNFTCLASNNNARKGFFKCADCFNLTHHEMPRWIRLDGDSTSNQTSEADFFIDDVLGIKLGEIRIGLDFSVGTGTFAARMKEFNVTIVSATINLGAPFSEMIALRGLVPLYLTINQRLPFFDNTLDLIHTTRFLDGWIDFVLLDFVLYDWDRVLRPGGLLWIDAFFCLKEDLYDYLQAFKMLRYKKHKWIVVPKIDKDDQEVFFSAVLEKPPRPFR 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00957 474 Coils Coil 69 89 - -
Vifa4g00957 474 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 37 472 - -
Vifa4g00957 474 Gene3D Vaccinia Virus protein VP39 318 461 IPR029063 -
Vifa4g00957 474 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 316 422 IPR004159 GO:0008168
Vifa4g00957 474 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 303 448 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00957 Vifa-Chr4 278273254 278274678 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00957 - - lja:Lj0g3v0200579.1 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00957 4 278273254 278274678 Vifa4g00957 4 278273254 278274678 ECH