Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00954 ATGGCAGAAACCGATCAAGCAAGACCATTAGCTCCAGTTAGAATCCACCCAAGAAGCGATGATGAAGAAAAAGCTCTCAAAACAAAGAACCGTAGAAGAAAGGTCAAGTTATGTGGTTGTATAACAGCGATTTTACTACTACTTTTAGTCATAGTAATTGTCATCTTAGTATTCACGGTTTTTAAGGTTAAAGATCCGAAGGTAACAACAAATGAGATCCACCTCACAAACTTTGGTCTCAACCTAGTTCAACTTCCAACACCTCAAGTTAAGATCAACATGACCATGGTAGTGAACATGTCTATTAAGAATTCTAATAGAGCATCCTTTAAGCTTGGGAATAGCACGACATCGGTGTACTATCGCGGTATATCGGTTGCGGACGCAGAGATACCGCCGGGACTTGTGATCAAGGCACGGAAGACGTCGGGGTTGAATGTGACGGTAGATGTTATGGCTGATCGCCTCGCTTCTAGTCCGGATTTGGTGGGAGATGTGCTTCAAGGGGAGATGATCATGAATACTTATTCGGTGATTCCGGGGAGGGTGAAGATTTTGTTTATTAAGAAACATGTTGAGGTGAAGATGAATTGTACTATGACGCTTAATATTTCAACGAGAGGAATTCAGGACATGAATTGCAGACGTAAGGTGAAACTTTAG 663 0.4178 MAETDQARPLAPVRIHPRSDDEEKALKTKNRRRKVKLCGCITAILLLLLVIVIVILVFTVFKVKDPKVTTNEIHLTNFGLNLVQLPTPQVKINMTMVVNMSIKNSNRASFKLGNSTTSVYYRGISVADAEIPPGLVIKARKTSGLNVTVDVMADRLASSPDLVGDVLQGEMIMNTYSVIPGRVKILFIKKHVEVKMNCTMTLNISTRGIQDMNCRRKVKL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00954 220 Gene3D - 52 209 - -
Vifa4g00954 220 SUPERFAMILY LEA14-like 47 159 - -
Vifa4g00954 220 Pfam Late embryogenesis abundant protein 100 199 IPR004864 -
Vifa4g00954 220 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 31 205 - -
Vifa4g00954 220 MobiDBLite consensus disorder prediction 1 27 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00954 - - tpra:123884615 357.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00954 4 277947294 277947956 Vifa4g00954 4 277947294 277947956 ECH