Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00951 ATGTCGCACTTGGTGAATAAAGTGAAGAACTTCGTATCTGACAAATTCCACGGCGTGGCCAAGCCAGAAGCGAGTGTCACCAACGTGGATTTTAAACGCGCAACCATGAGTAGCGTCGAGTATTTGGCCAAAGTTGCTGTTCATAATCCATATTCACATTCTCTCCCTATTTGTGAGGTCAACTACTCATTCAAAAGCGCCACTAGGGAGATAGTATCAGGGACAATACCAGATCCAGGGTCATTGAAAGCAAAGGATACAACAATGGTGGATGTACATGTGAAGGTGCCATATAACATATTGATGAGCTTGGCAAAGGACATTGGAGGTGATTGGGATATTGATTATCAGTTGGATTTAGGTCTTGTTATTGACCTTCCTGTTGTTGGTAACTTCACCATTCCTCTCTCTCATAAGGGAGAGGTTAAGCTTCCAACACTTTTTTAA 447 0.4251 MSHLVNKVKNFVSDKFHGVAKPEASVTNVDFKRATMSSVEYLAKVAVHNPYSHSLPICEVNYSFKSATREIVSGTIPDPGSLKAKDTTMVDVHVKVPYNILMSLAKDIGGDWDIDYQLDLGLVIDLPVVGNFTIPLSHKGEVKLPTLF 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00951 148 SMART why 24 141 IPR013990 GO:0009269
Vifa4g00951 148 Gene3D - 18 148 - -
Vifa4g00951 148 FunFam Desiccation protectant protein Lea14-like 17 148 - -
Vifa4g00951 148 PANTHER - 3 145 IPR045043 -
Vifa4g00951 148 Pfam Late embryogenesis abundant protein 44 140 IPR004864 -
Vifa4g00951 148 SUPERFAMILY LEA14-like 2 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00951 Vifa-Chr4 277796906 277797435 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00951 - - gmx:547533 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00951 4 277796906 277797435 Vifa4g00951 4 277796906 277797435 ECH