Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00921 ATGAAGAACACTTTCAAAGACCCAGATCACCACAATCTCCACTCATCAATAACCTTCTCAAAGCTTATAACTTTCCTCTTCCTCTTAATCTCAATCTCATACCTCTTCTACTCCCTCAGATTCGTTACACATAACTCCAATTGTGACCAAAACCTACCCATTATTCATAACACCCACACAAGTTTCCAACCTCAAACACACAACCCATTTCAAGAAAAACAACAAGAGTCTCCTACCAACATCTCACACATAGTGTTCGGAATCGGCGCATCAGCGAAGCTCTGGAAAAAGCGAAAAGAGTACATCAAACTCTGGTACAAACCAAACCAAATGCGCGGCATTGTCTGGTTAGAACAAAAGGTGAAACCAGATCCTGAAGACAAAAACCTTTTACCAATTCTAAAAATTTCCGAAGACACAACGAGTTTCAAGTACAAAAACTCCAAGGGTCATAAATCAGCTATAAGGATATCTAGGATTGTGTCGGAGACCGTGCGGGTTGGGATGAAGGATGTGCGGTGGTTTGTAATGGGAGACGATGATACGTTTTTTGTCGGGGAGAATTTGGTGAATGTGTTGAGGAAATATGATCATAATGGGTTTTATTATATTGGGAGTTCTTCCGAGAGTCATTTGCAGAATATTTATTTTTCTTATAATATGGCTTATGGGGGTGGTGGCTTTGCTATTAGCTATCCTTTGGCTCTGGCTTTGGAGAAAATGCAAGATAGGTGTATTCAAAGGTATCCTGCTTTGTATGGCTCTGATGATAGGATTCAAGCTTGTATGTCTGAGCTTGGTGTTCCTCTTACCAAGGAGAAAGGTTTTCATCAGTTTGATGTATATGGAAATCTCTTCGGGCTTCTTGCAGCCCATCCTATTGCACCATTGGTATCTCTCCACCACTTAGACGTAGTGGAGCCCATCTTTCCGAATGTTAGCCGGGTCCAAGCCCTAAAGCGTCTTACTGTGCCCATGAATTTGGACCCGGCCGGACTCATCCAACAATCCATTTGCTACGACAAGACACGGAATTGGACCATATCCGTGTCATGGGGCTACGCGGTTCAAATTTTCCGTGGCATTTTCTCGGCTAGAGAGATGGAGATGCCAGCAAGGACCTTTCTAAATTGGTACAAGCGGGCTGATTACACTGCATATCCATTCAACACGCGCCCAGTCAGCCGAAATGTTTGTCAGAAACCGTTTATTTATTATTTGTCTAATGCAATTCAAGATGAGGATACAGATGAGACTGCTAGTCGATATGTCCGAACTCAAACGAATCCGGATTGCAAGTGGAAAATGGAGGATCCAACTAAAATCAAAGTGGTAATGGTTTATAAAAAAGCCAACCCGCATTTATGGGACAAGTCTCCAAGAAGAAATTGTTGTAGGGTTCAAGATACAAAGAGGAAAGGAACAATGGTGATTGATGTAGGGGAATGCAGAGAAGATGAAGTTGTTGAATTGTAA 1476 0.4214 MKNTFKDPDHHNLHSSITFSKLITFLFLLISISYLFYSLRFVTHNSNCDQNLPIIHNTHTSFQPQTHNPFQEKQQESPTNISHIVFGIGASAKLWKKRKEYIKLWYKPNQMRGIVWLEQKVKPDPEDKNLLPILKISEDTTSFKYKNSKGHKSAIRISRIVSETVRVGMKDVRWFVMGDDDTFFVGENLVNVLRKYDHNGFYYIGSSSESHLQNIYFSYNMAYGGGGFAISYPLALALEKMQDRCIQRYPALYGSDDRIQACMSELGVPLTKEKGFHQFDVYGNLFGLLAAHPIAPLVSLHHLDVVEPIFPNVSRVQALKRLTVPMNLDPAGLIQQSICYDKTRNWTISVSWGYAVQIFRGIFSAREMEMPARTFLNWYKRADYTAYPFNTRPVSRNVCQKPFIYYLSNAIQDEDTDETASRYVRTQTNPDCKWKMEDPTKIKVVMVYKKANPHLWDKSPRRNCCRVQDTKRKGTMVIDVGECREDEVVEL 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00921 491 PANTHER FRINGE-RELATED 19 489 - -
Vifa4g00921 491 Gene3D - 71 325 - -
Vifa4g00921 491 Pfam Protein of unknown function, DUF604 213 465 IPR006740 -
Vifa4g00921 491 FunFam Fringe-related protein-like 71 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00921 Vifa-Chr4 267448879 267452806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00921 20 485 Glycosyltransferase AT5G41460 63.599 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00921 - - gmx:100789583 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00921 4 267448879 267452806 Vifa4g00921 4 267448879 267452806 ECH