Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00919 ATGGCTCAAGAAAATGTGAAAAGATCACCTTCTCAAATAAAATACACCATGGTTAAATCCATCATAAGATTACTTGTGTTTTTAGTGTTTCTGGGTTTACTTTGCATTTTCATTATGATGCCTACAGCAACTTTCAGAAAAAAATGGAACCCGAAAATTCGAGCAAAGACTAATTCTACTTATTTTGGTGTTCAAGGTTTTAGGATTCTTATATATACTTTTCCAGTCATGTTAGTTGCTACTCTCGGATGTGTTTATATCCACATAGCCAAAAAATCAAATGAAATTGGCAATGGCAAGAAACATGAATCAACAATATGGAAACGTCCAATGCTTGTAAAAGGTCCTCTTGGGATTGTTTCAATGACAGAAATAACTTTCTTGCTTATGTTCATTGCTCTTCTTGTTTGGACTTTTGCAACTTATTTACATAATGACTTTGTATCAATTGCATCATCACCAAAGGAAGAAGACGGCCCTAAAGTGTGGCAAGAGAAATTGGAGAGTGTGGGATTAAGGTTAGGACTGGTCGGAAACATATGTTTAGTGTTGTTGTTTTTTCCAGTGGCACGTGGCACGTCCGTGCTACCAATGTTTGGGCTCACTTCTGAGGGTTGCATTAAGTACCATATATGGCTTGGGCACGTGCTGATGATGATTTTCACAGCTCATGGAGTTTGTTATATTATCTATTGGGCATCTACTAATCAAATTTCACAGATGTTAAAATGGAATAAAGTTGGAGTATCACAAATAGCTGGAGAGATATCTTTGCTTGCTGGTTTGTTTTTATGGGTTGCAACTATTCCAAAAGTTAGAAGAAAATTTTTTGAACTCTTTTTCTACACTCATAATTTATACATTATCTTCATCATCTTCTTCATTTTTCATGTTGGCATTGCTTTTGCCTACATTATGCTTCCTGGTTTCTATCTCTTCATGGTTGATCGTTACCTACGATTCCTCCAATCTAGATGCCAAGTTCGTTTAGTTTCGTCTCGTATTTTGTCTTGTGAAGTCGTTGAACTCAACTTCTCTAAGGGTCATGAGTTGAGTTATAATCCAACAAGTGTGATGTTCATAAATGTTCCAAGCATATCAAAATTGCAATGGCATCCATTTACTATTACTTCTAATAGTAACTTGGAGCAAGATAAGCTAAGTGTTGTAATTAAATGTGAAGGAACTTGGACACAAAAGCTTTATCAATTGCTCTCCAATCCTTTGCCGATCGATCGCCTTCAAATATCCGTCGAAGGTCCTTATGGACCCACTTCAACAAATTACCTAAGGCATGATACACTTGTGATGATAAGTGGAGGAAGTGGCATAACACCATTTATCTCAATCATTAGAGAGCTAATATATCTTAGCACAACATTCAAATGCAAAACACCAAACATTCTCCTAATTTGTTCATTCAAAAACACTTCATCTCTCTCAATGCTAGATTTGATCCTACCAATTTCAAGCACACCACAAGACATATCTAACATGCAACTACAAATTGAGGCTTACATCACAAGAGATAAAGAGTTTAAACCAGATACTCCAATTCATCCTCAAACTTTATGGTTCAAGCCAAATCCAACAGATGCACCAATACGCGCTATATTAGGACCAAACGGTTGGATCTGGCTTGGTGCTATAATCTCGTCCTCGTTCATCATCTTCCTTATCATAATCGGAATCATTACTCATTACTATATTTTTCCTATTGATCATAACACGAATAAGATATTCTCGTATACTCTAAGGTCATTCCTTCACATGCTAGTAATATGTGTTTCGGTAGCTGTTGTTGCTAGTGTCGTAGTGCTTTCGAACAAGAAACAGAATGCTAAAGAAGCTAAACAGATTCAGAACATGGAAGGGTCAACACCAACAGTGTCACCGAATTCAATGATTTATAATGCAGATAGAGAATTGGAAAGCTTTCCTTATCAGTCACTTGTTCAATCTACCAATGTGCACTACGGGGCAAGACCTGACTTGAGTCGACTTCTATTAGAAATCAAAGGGTCAAGTGTGGGAGTTTTTGCATCAGGACCTAAGCAACTGAGACAAAATGTTGCAACCATTTGTTCATCTGGTTTAGTTGAAAATATGCATTTCGAATCAATCAGTTTTACCTGGTGA 2139 0.3675 MAQENVKRSPSQIKYTMVKSIIRLLVFLVFLGLLCIFIMMPTATFRKKWNPKIRAKTNSTYFGVQGFRILIYTFPVMLVATLGCVYIHIAKKSNEIGNGKKHESTIWKRPMLVKGPLGIVSMTEITFLLMFIALLVWTFATYLHNDFVSIASSPKEEDGPKVWQEKLESVGLRLGLVGNICLVLLFFPVARGTSVLPMFGLTSEGCIKYHIWLGHVLMMIFTAHGVCYIIYWASTNQISQMLKWNKVGVSQIAGEISLLAGLFLWVATIPKVRRKFFELFFYTHNLYIIFIIFFIFHVGIAFAYIMLPGFYLFMVDRYLRFLQSRCQVRLVSSRILSCEVVELNFSKGHELSYNPTSVMFINVPSISKLQWHPFTITSNSNLEQDKLSVVIKCEGTWTQKLYQLLSNPLPIDRLQISVEGPYGPTSTNYLRHDTLVMISGGSGITPFISIIRELIYLSTTFKCKTPNILLICSFKNTSSLSMLDLILPISSTPQDISNMQLQIEAYITRDKEFKPDTPIHPQTLWFKPNPTDAPIRAILGPNGWIWLGAIISSSFIIFLIIIGIITHYYIFPIDHNTNKIFSYTLRSFLHMLVICVSVAVVASVVVLSNKKQNAKEAKQIQNMEGSTPTVSPNSMIYNADRELESFPYQSLVQSTNVHYGARPDLSRLLLEIKGSSVGVFASGPKQLRQNVATICSSGLVENMHFESISFTW 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00919 712 SFLD Ferric reductase subgroup (FRE) 17 712 - -
Vifa4g00919 712 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 323 428 IPR017927 GO:0016491
Vifa4g00919 712 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 416 489 IPR039261 -
Vifa4g00919 712 SUPERFAMILY Riboflavin synthase domain-like 323 404 IPR017938 -
Vifa4g00919 712 Gene3D - 416 533 IPR039261 -
Vifa4g00919 712 Pfam Ferric reductase NAD binding domain 432 696 IPR013121 GO:0016491
Vifa4g00919 712 FunFam Ferric reduction oxidase 3 421 538 - -
Vifa4g00919 712 PANTHER NADPH OXIDASE 26 710 - -
Vifa4g00919 712 Pfam Ferric reductase like transmembrane component 174 294 IPR013130 -
Vifa4g00919 712 Pfam FAD-binding domain 328 426 IPR013112 GO:0016491
Vifa4g00919 712 SFLD Ferric Reductase Domain 40 712 - -
Vifa4g00919 712 CDD NOX_Duox_like_FAD_NADP 337 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00919 Vifa-Chr4 266380906 266386765 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00919 17 712 Miscellaneous Gene Families AT1G01580 57.670 0.0 829
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00919 K00521 - gmx:100790114 1036.94