Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00707 ATGAACGGCGGTGGTGGTAACTTCCCGCCACCGCAATCTAACGGCGGCGATTTCCTTCTCTCTCTTCTTCAAAAACCCCGTCTCCAGACTCAGACTCACCCAACCCAATCGCCAATCACCATACCTCAACAATCTCCCACCATGGATCCCGCCGTCGCCATGATGGGCCCCACAATCCCGTTCTCCACATCCCCGTATCAAATCAACGGTCACGATCATCTCAACCATCATCATCCCTATCATTATCAGAATCAGAATCTTTCACCGTGGTCCCACACACCTTCTCCTCCTTACCCGCAAAACGCATTCGGGTTGCTCCATAACCCGTTTTCACTTCCTCCGGTACCGGAAACCAGTTATTCCAACAACAACAACAACAACACTCCACTTCACTTCACCAACGGTGTTTCACTCGCTGAAAATCTAAGAAGATTAGGGTTTCCAATTGAGAACAACAACAGTAACCGTGTTAATTCTTTCTCTCATCAACCGCAACAACACCAACAGAAACCGGAACTGAAGTTACAGTTTGGATCTTTACCCACGGTTTCTTACACTACTACTACACCTGAAGTTTCTTCTAATGGAAGATTTGATAGGAAGAATAATCATGAAAGAGGGGTTATTGGAGATTTTAGGTCAAATGCGCAATCTACTGAACAAACTAAGGCTCCACCTGGGTTTGGGAACAATGGAAAGGGATTAGGGTTTGGTGAAATGGGTGGTAGGAATGAGGATTTGGCTAGTAAGCTGGAAAATTTGAGAATAGGGTTTGGTGAAATGGGTGGTAGGAATGAGGATTTGGCTAGTAAGTTGGAAAATTTGAGAATAGGGTTTGGTGGAAAGAGCAATAATAAAGGCAATGCGGGTCATGGATTGAGGCTTTCTGATCAGATTGATCACCCTGGTCCACCCTCTGGGAGTAATCTTCATTCTGATTATGAGGATATTGGTGCTGTTGGAGAGCAATTGGCGGATTCGTTGTTGCTTGAGGATGAGCTTGATGACAAGAGTAGTAACTCTAAGAAACGACATGGTCCTAAGGAGAAGGATGCTAGAGCTTCAGACTCAAGAGGAAAGCAGTTGCTAAGTCAGCGGGCAAGAACATTTAAAAGACAAATGATGTGCCGTAGGGACATTGATGGTCTTAGTGTTCCTTTCCTTGCAATATATGAATCTCTGATACCTCCAGAAGAAGAAAAGTTGAAGCAGAAGCAATTGTTAGGGTTACTAGAGAAGTTAGTTTGCAAGGAGTGGCCAATGGCTCGGCTTTATCTCTATGGATCATGTGCTAATTCATTTGGTGTTTCTAAAAGTGACATTGATGTTTGCCTTGCTATTCAGGAAGTTGATATGGACAAATCTAAGATCATAATGAAATTGGCTGGTATTTTGCAATCCGATAGCCTGCAGAATGTTCAGGCATTGACACGAGCAAGGGTTCCTATAGTAAAGCTCATGGATCCAGCTACAGGAATCTCTTGTGATATATGCATCAACAACCTCCTTGCTGTTGTAAATACTAAGCTTCTCCGGGATTATGCAAATATTGATTCTAGGCTACGGCAGCTGGCTTTTATCATTAAACACTGGGCAAAGTCAAGAGGAGTCAATGAAACTTACCACGGGACCTTATCTAGCTATGCGTATGTGTTAATGTGTATTCATTTTCTACAACAGCGACGACCTGCTATCCTTCCATGTTTACAGGGGATGGATGCAACATACTCAGTTACCGTTGACAATGTGGATTGTGCATTCTTTGACCAAGTTGAAAAACTAGGTCATTTTGGACGACATAACAAGGAATCTATTGCTCATCTTGTGTGGGGATTTTTCTTTTATTGGGCATATTGTCATGATTATGCAAATTCTGTTATATCTGTACGCACAGGAAGCACAATCAGCAAGCGAGATAAGGATTGGACAAGAAGGGTTGGTAATGATCGGCATTTGATATGTATAGAGGATCCTTTTGAAATATCTCATGATCTGGGTCGAGTGGTTGATAAACGCAGCATCAAAGTTCTGAGAGAAGAGTTTGAACGTGCTGCAGATATTATGCAGTATGATCCAAATCCATGTGTTAAACTTTTTGAACCTTATGTTCGTAGCAGTTGA 2121 0.4272 MNGGGGNFPPPQSNGGDFLLSLLQKPRLQTQTHPTQSPITIPQQSPTMDPAVAMMGPTIPFSTSPYQINGHDHLNHHHPYHYQNQNLSPWSHTPSPPYPQNAFGLLHNPFSLPPVPETSYSNNNNNNTPLHFTNGVSLAENLRRLGFPIENNNSNRVNSFSHQPQQHQQKPELKLQFGSLPTVSYTTTTPEVSSNGRFDRKNNHERGVIGDFRSNAQSTEQTKAPPGFGNNGKGLGFGEMGGRNEDLASKLENLRIGFGEMGGRNEDLASKLENLRIGFGGKSNNKGNAGHGLRLSDQIDHPGPPSGSNLHSDYEDIGAVGEQLADSLLLEDELDDKSSNSKKRHGPKEKDARASDSRGKQLLSQRARTFKRQMMCRRDIDGLSVPFLAIYESLIPPEEEKLKQKQLLGLLEKLVCKEWPMARLYLYGSCANSFGVSKSDIDVCLAIQEVDMDKSKIIMKLAGILQSDSLQNVQALTRARVPIVKLMDPATGISCDICINNLLAVVNTKLLRDYANIDSRLRQLAFIIKHWAKSRGVNETYHGTLSSYAYVLMCIHFLQQRRPAILPCLQGMDATYSVTVDNVDCAFFDQVEKLGHFGRHNKESIAHLVWGFFFYWAYCHDYANSVISVRTGSTISKRDKDWTRRVGNDRHLICIEDPFEISHDLGRVVDKRSIKVLREEFERAADIMQYDPNPCVKLFEPYVRSS 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00707 706 MobiDBLite consensus disorder prediction 213 236 - -
Vifa4g00707 706 SUPERFAMILY PAP/OAS1 substrate-binding domain 520 689 - -
Vifa4g00707 706 Gene3D - 518 686 - -
Vifa4g00707 706 FunFam Terminal uridylyltransferase cid1 518 686 - -
Vifa4g00707 706 Pfam TUTase nucleotidyltransferase domain 399 497 IPR045100 GO:0016779
Vifa4g00707 706 Gene3D Beta Polymerase, domain 2 404 517 IPR043519 -
Vifa4g00707 706 CDD NT_PAP_TUTase 412 515 - -
Vifa4g00707 706 PANTHER POLY A POLYMERASE CID PAP -RELATED 207 691 - -
Vifa4g00707 706 MobiDBLite consensus disorder prediction 288 314 - -
Vifa4g00707 706 Pfam Cid1 family poly A polymerase 604 663 IPR002058 -
Vifa4g00707 706 FunFam Terminal uridylyltransferase cid1 404 517 - -
Vifa4g00707 706 MobiDBLite consensus disorder prediction 332 362 - -
Vifa4g00707 706 MobiDBLite consensus disorder prediction 332 357 - -
Vifa4g00707 706 SUPERFAMILY Nucleotidyltransferase 380 516 IPR043519 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00707 - - cam:101492938 1026.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00707 4 205491439 205497721 Vifa4g00707 4 205491439 205497721 ECH