Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00706 ATGGAGAATCAAAACAAGGATAACAAAGTCAACACCGACAAATCCCGAAACAACAATCTCCCAAAAGTATTCCTTCACGGTCCTCTTCACGGTCCTCCCAACTTCTCCGTCACTATCCTCCGTCCCAATCCTTCTCACAATTTCCATATCTTAAACCCTTCTTCAATTCTCCCTCTCCAACAATTCATAGCCACAAATCCTCACCATGCCTCCTCCATCGCCGCAATCGTCACTATCAATCTCCACCCCGTAAATGCCGATGACATCCGACTTCTTCCCTCTCTCCGTTTCATCTGCACTCCCAGCGCCGGAACTAATCATATTGACCTCTCCGAGTGCCGCCGGCGGGGAATCCAAGTCGCCAACGCCGGGAATATTTTCTCGGCGGATGTTGCTGATATGGCCGTGGCTTTGTTGATTGACGTTAGCAGGAAAATTTCTGCGGCTGATCGCTGGTTGAGAAGACAACTTCACGCTACCTCTTGGGATTTTCCACTTGGTTCTAAGTTGACAGGAAAAAAGATTGGAATTGTTGGTATGGGAAGGATTGGCTCAGAAGTTGCAAAGAGGCTTGAAGGATTCAATTGCATGATATCATACACTTCTAAGAACAAAAAACCATTAGTTTCATACCCTTTCTATTCAACTGTCTTAGAACTTGCTACCAACACCAATGCACTTATTCTTTGTTGTGAGCTAAACGACCAAACAAGACACATTGTGAACAAAGAAGTCATGTTGGCATTGGGAAAAGGAGGAATCATAGTGAATGTTGGAAGAGGTGGTCTCATTGATGAAAAGGAATTGTTAAGGTGTTTGACTGAAGGTGAGATTGGAGGGGCTGGTTTGGATGTGTTTGAGAATGAACCTCATGTTCCTAAAGAGTTCTTTTCATTGGATAATGTAGTTCTGTCGCCACATGCAGCTGTCGTAACTTCAGGGTCTTTCAATGGTATTTGCCAACTTGTGGAACGAAATTTGGAAGCTTTCTTTTCAAATAAGCCTTTGATTACTCCAATTATATAG 1026 0.4366 MENQNKDNKVNTDKSRNNNLPKVFLHGPLHGPPNFSVTILRPNPSHNFHILNPSSILPLQQFIATNPHHASSIAAIVTINLHPVNADDIRLLPSLRFICTPSAGTNHIDLSECRRRGIQVANAGNIFSADVADMAVALLIDVSRKISAADRWLRRQLHATSWDFPLGSKLTGKKIGIVGMGRIGSEVAKRLEGFNCMISYTSKNKKPLVSYPFYSTVLELATNTNALILCCELNDQTRHIVNKEVMLALGKGGIIVNVGRGGLIDEKELLRCLTEGEIGGAGLDVFENEPHVPKEFFSLDNVVLSPHAAVVTSGSFNGICQLVERNLEAFFSNKPLITPII 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00706 341 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 44 336 - -
Vifa4g00706 341 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 129 309 IPR036291 -
Vifa4g00706 341 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 136 309 IPR006140 GO:0051287
Vifa4g00706 341 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 67 157 - -
Vifa4g00706 341 Gene3D - 128 312 - -
Vifa4g00706 341 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 70 339 IPR006139 GO:0016616|GO:0051287
Vifa4g00706 341 CDD HPPR 21 332 - -
Vifa4g00706 341 FunFam Putative 2-hydroxyacid dehydrogenase 128 312 - -
Vifa4g00706 341 Gene3D - 68 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00706 Vifa-Chr4 204817909 204819244 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00706 K15919 - gmx:100777313 432.18