Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00704 ATGGCGAAAGAGCTTCCCAAAGTGCTTGTTCTTGGTCCACCAATCTGCTTCTCAACTTTCGAATCACTTTACTCTCACAAGTTCAATTTAATTAACCCCAAACCCTGTGGACTTCCCTTGCAACAGTTCATGGTTGCCAACCGCCACAACCCGTCAACAATTTCTGCAATACTCTGTGGCGCCCCATATCCCATTTCCCTCGACGTCCTCAGTCTCCTCCCGTCGCTCCGTCTCATTGTCACCGCTAGTGCTGGAACTGACCACATTGACCTGCACGAGTGCCATCGTCGAGGAATTCATGTTGCCGGAGCTGGAGGGCTTTTCTCGGAAGATGTGGCTGATATGGCCGTGGCGTTGCTCATTGATGTAATGAGAAAAATAACTGCAGCTGATAGATATTTGAGAACGCGGACAAACCTTTCTGACCCTTGGGATTTTCCCCTTGGCCACCAGTTATCAGGCAAGCGGGTAGGCATTGTTGGATTGGGAAATATTGGCATGGAAGTCGCAAAGCGATTAGAGTCATTTAACTGCACCATCATGTACCACTCAAAACATATAAAACCATCCATTTCTTACCCTTTCTATTCCAATATTGTTGATCTTGCAACTTCTAGCGACACACTTGTGGTATGTTGCGCACTAAATGACCAAACAAGACACATTGTGAACAAAGAAGTCATGTTGGCATTGGGAAAAGGAGGAATCATAGTGAATGTTGGAAGAGGTGGTCTCATTGATGAAAAGGAATTGTTAAGGTGTTTGATTGAAGGTGAGATTGGAGGTGCTGGTTTGGATGTGTTTGAGAATGAACCTCATGTTCCTAAACAGTTCTTTTCTTTGGATAATGTTGTTCTGTCGCCACATGCAGCTGTTTTTACTTTGGAAACTACATTGAAATTGTGTGAACTTGTGGCAGAGAATTTAAAAGCTTTCTTCTTGAATAAGCCCTTAATTACTCCAGTGATGTTGGGTTAG 978 0.4407 MAKELPKVLVLGPPICFSTFESLYSHKFNLINPKPCGLPLQQFMVANRHNPSTISAILCGAPYPISLDVLSLLPSLRLIVTASAGTDHIDLHECHRRGIHVAGAGGLFSEDVADMAVALLIDVMRKITAADRYLRTRTNLSDPWDFPLGHQLSGKRVGIVGLGNIGMEVAKRLESFNCTIMYHSKHIKPSISYPFYSNIVDLATSSDTLVVCCALNDQTRHIVNKEVMLALGKGGIIVNVGRGGLIDEKELLRCLIEGEIGGAGLDVFENEPHVPKQFFSLDNVVLSPHAAVFTLETTLKLCELVAENLKAFFLNKPLITPVMLG 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00704 325 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 5 318 - -
Vifa4g00704 325 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 117 291 IPR006140 GO:0051287
Vifa4g00704 325 FunFam Putative 2-hydroxyacid dehydrogenase 109 294 - -
Vifa4g00704 325 CDD HPPR 6 313 - -
Vifa4g00704 325 Gene3D - 51 317 - -
Vifa4g00704 325 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 157 184 IPR029752 -
Vifa4g00704 325 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 57 322 IPR006139 GO:0016616|GO:0051287
Vifa4g00704 325 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 27 136 - -
Vifa4g00704 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 109 291 IPR036291 -
Vifa4g00704 325 Gene3D - 109 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00704 Vifa-Chr4 204763315 204764360 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00704 K15919 - gmx:100776772 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00704 4 204763315 204764360 Vifa4g00704 4 204763315 204764360 ECH