Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00696 ATGGGTCCCGAAGCTAACGGCACGGAAACCGAGAAACCAACACAAACGGTTCAACTCGGTAGTGATTTTATTTTACCGGAAAATTCCGTTAACGGTTACGAAACCGTTACTAACAGCCAAAGTAGTTACAGTCATGGCGGTGCTGATAGCAAAAACGATGGCAACGTAGGGTTTATTCCTCCTCATTCACTTCTTCCGATGCCGGTATCACCGGAGGTTTTTCAAAGAAACAAAAACGACGAGTCTCTGCCGAGTAACTCCGTCAACAGCACCATGCCGGATCTCGGAAGCTTCATCCGTCAGCGGAGCAGCGATTTATCAACGGCGATTGCGAAACGAGTCTCATCGTTTCGAAAATCGATGGAGGAGAACGAGGAGAAGGATATGAAGAATAACGATCGGAATCAGGATGTGACGGAATTCAGTCTTTCAGGACTCAAGGTTGTGGTGAAAGTGAAACCAGAGGATGAACCAGCGATGAAAGGGAGGATAACGTTCTTCTCGAGGTCAGGTTGCAGAGACTGCACGGCGGTGAGGAGGTTCTTCAAAGAGAGAGAACTCAAGTTCGTTGAAATCAACGTCGACGTGTTTCGCGAGAGGGAGAAAGAGCTACGAGAAAGAACGGGAAATACAACCGTGCCGATGATTTTCTTCAACGAGAAGCTGATCGGAGGGTTAGTCGCCTTGAACTCGCTGCGAAACAGCGGCGAGTTTGAACGGAGGTTGACGGAGATGGTGGTTGAGAAATTCGCCGGCGATGATACGCCGTTACCGCCTGTGTACGGTTGTGATTATTTCGAGGCGGATCGAACGGACGAGATGGTTGGACTTGTTAGTCTTTTGCGGCGGAAATTGTTCGTTCAAGATTGGTTGAGGAGAATGAAAATCGTTAAGAATTGTTTTGAAGGGAACGAGTTTGTGGCGGTTGTGATTCAACACTTCAAGTGCGCGCGTAACGAGGCTGTTGAGATTGGAAAAGAGTTATCCAGGAAGCATTTCATCCATCATGTTTCCGGGGATAATGGCTTTGTAGACGGAAATAACTTGTATCGTTTCCTTGAGCATGAACCCTTTATCCCCAGATGCTTTAACTTCCGTGGTGCAGTAAATGACAATGAACCAAAGCCAGCAGCTTCAGTTTGCGACAGGCTTACCAAGATTATGTCTGCCATTCTTGAGTCTTATGCTTCTGATGATAGAAAACGTGTTGATTATGCTGCCATTAGCAAAAGCGAAGAATTTCGTAGGTATGTAAACATGACTCAGGATTTGCAGCGAGTGAATATCGGTGAACTATCAGAAAATGAGAAACTTGCCTTCTTCTTAAATTTATATAATGCCATGGTCATTCATGCTGTCATTAGCGTAGGGAGCCCTGAAGGTGTAATTAATAGGAGATCCTTCTTCAATGACTTCCTGTATTTGATTGGAGGATATCCTTATTCTCTTGCCATTATTGAAAATGGCATTCTTAGATGTAATCAAAGGTCACCATATTCCATAATGAAGCCCTTTAGCACCGGAGATAAACGGTTAGAGGTTGCTCTTGTCAAGTTAAACCCGCTATTCCATTTTGGGCTTTGTAATGGTACAAAATCTAGCCCCAATGTGAGGTTCTTTTCACCCAATAGAATTTTAGATGAATTAAGAGGTGCTGCAAGAGAGATCTTTGAGAATGGTGGCATTGAAGTGGACCTAGAGAAGAGAACCGTTCATCTTCCATGGATTTTCAAGTGGTTCAGTGGAGATTTTGGACAAGAGCAAGAAATACTTAAGTGGATACTTAATTACTTGGAACCAAATAAAGCAGGTCTAGTGACACATCTCTTAAGTGATACTGAACCTGTTAATATATCTTACCAGAATTTCGATTGGTCGTTAAATTCTTGA 1890 0.4381 MGPEANGTETEKPTQTVQLGSDFILPENSVNGYETVTNSQSSYSHGGADSKNDGNVGFIPPHSLLPMPVSPEVFQRNKNDESLPSNSVNSTMPDLGSFIRQRSSDLSTAIAKRVSSFRKSMEENEEKDMKNNDRNQDVTEFSLSGLKVVVKVKPEDEPAMKGRITFFSRSGCRDCTAVRRFFKERELKFVEINVDVFREREKELRERTGNTTVPMIFFNEKLIGGLVALNSLRNSGEFERRLTEMVVEKFAGDDTPLPPVYGCDYFEADRTDEMVGLVSLLRRKLFVQDWLRRMKIVKNCFEGNEFVAVVIQHFKCARNEAVEIGKELSRKHFIHHVSGDNGFVDGNNLYRFLEHEPFIPRCFNFRGAVNDNEPKPAASVCDRLTKIMSAILESYASDDRKRVDYAAISKSEEFRRYVNMTQDLQRVNIGELSENEKLAFFLNLYNAMVIHAVISVGSPEGVINRRSFFNDFLYLIGGYPYSLAIIENGILRCNQRSPYSIMKPFSTGDKRLEVALVKLNPLFHFGLCNGTKSSPNVRFFSPNRILDELRGAAREIFENGGIEVDLEKRTVHLPWIFKWFSGDFGQEQEILKWILNYLEPNKAGLVTHLLSDTEPVNISYQNFDWSLNS 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00696 629 MobiDBLite consensus disorder prediction 1 69 - -
Vifa4g00696 629 Pfam Protein of unknown function, DUF547 431 555 IPR006869 -
Vifa4g00696 629 SUPERFAMILY "Winged helix" DNA-binding domain 272 378 IPR036390 -
Vifa4g00696 629 Coils Coil 187 207 - -
Vifa4g00696 629 SUPERFAMILY Thioredoxin-like 158 244 IPR036249 -
Vifa4g00696 629 Gene3D - 269 408 IPR036388 -
Vifa4g00696 629 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 46 628 - -
Vifa4g00696 629 Pfam Glutaredoxin 164 223 IPR002109 -
Vifa4g00696 629 SMART DEP_3 281 354 IPR000591 GO:0035556
Vifa4g00696 629 MobiDBLite consensus disorder prediction 8 49 - -
Vifa4g00696 629 CDD DEP 273 351 - -
Vifa4g00696 629 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 293 352 IPR000591 GO:0035556
Vifa4g00696 629 Gene3D Glutaredoxin 158 246 - -
Vifa4g00696 629 ProSiteProfiles Glutaredoxin domain profile. 152 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00696 Vifa-Chr4 203447167 203452321 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00696 - - gmx:100810111 864.759