Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00678 ATGGAAGATCAACCACCACAAGGAACGTTACAGAACGTTCTAGAACAAGAATCTCTCAAGTGGGTTTTCGTTGGTGGCAAAGGTGGTGTTGGAAAAACCACATGCAGTTCTATCCTCTCTATCCTTCTCGCTTCTGTTCGCTCTTCTGTTCTCATCATCTCAACCGACCCTGCTCACAATCTCAGCGATGCTTTTCAACAGCGTTTCACAAAAACCCCTACTTTGGTTAATGGTTTCTCCAATCTATATGCAATGGAAGTGGATCCTGCTGTTGAGCATGATGATATGGGTGGTTCTGATGGGATGGATAGTTTGTTCTCTGAGCTTGCTGGTGCAATTCCTGGGATTGATGAGGCTATGAGCTTTGCTGAGATGTTGAAATTGGTGCAGACAATGGACTATTCTGTCATTGTATTTGACACTGCTCCAACTGGTCATACACTTAGACTGTTGCAATTCCCCTCAGTTTTAGAGAAGGGTCTTGCAAAGATGATGTCTTTGAAAAATAAATTTGGGGGTTTGTTTAGTCAGATGACTCGCATGTTTGGCATGGGTGATGATTTTGGTGAAGATGCAATTCTCGGAAAGCTTGAAGGAATGAAGGATGTAATTGAACAAGTTAATCGGCAATTCAAAGATCCAGACATGACAACCTTTGTCTGTGTTTGCATTCCCGAATTTCTCTCGCTTTACGAAACCGAAAGATTGGTTCAAGAACTCACAAAGTTTGAGATTGACACACACAACATCATCATTAATCAAGTAATCTTTGATGACGAAGATGTTGAATCCAAGTTACTTAAAGCAAGAATGAAAATGCAACAGAAGTATTTGGACCAGTTTTACATGTTGTATGATGACTTTAATATTACTAAGTTGCCACTTCTTCCAGAAGAGGTTACCGGTGTTGATGCTCTGAGATCATTTTCACGACATTTTACGATACCGTATCAACCGTTATGCAGTCGTGATCAAGTAGAGCGATTAGAGCATAGAGTATCGGCGTTACAAAGCCAGTTAAAAGATGCTGAAGAAGAGTTGGAGAAAGTCAAAAGAGGGAAGCATTAG 1068 0.4082 MEDQPPQGTLQNVLEQESLKWVFVGGKGGVGKTTCSSILSILLASVRSSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPAVEHDDMGGSDGMDSLFSELAGAIPGIDEAMSFAEMLKLVQTMDYSVIVFDTAPTGHTLRLLQFPSVLEKGLAKMMSLKNKFGGLFSQMTRMFGMGDDFGEDAILGKLEGMKDVIEQVNRQFKDPDMTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIIINQVIFDDEDVESKLLKARMKMQQKYLDQFYMLYDDFNITKLPLLPEEVTGVDALRSFSRHFTIPYQPLCSRDQVERLEHRVSALQSQLKDAEEELEKVKRGKH 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00678 355 Gene3D - 1 333 IPR027417 -
Vifa4g00678 355 FunFam ATPase ASNA1 1 322 - -
Vifa4g00678 355 NCBIfam TRC40/GET3/ArsA family transport-energizing ATPase 23 311 IPR016300 GO:0005524|GO:0016887
Vifa4g00678 355 Pfam Anion-transporting ATPase 20 312 IPR025723 -
Vifa4g00678 355 Hamap ATPase <gene_name> [GET3]. 6 321 IPR027542 GO:0005524|GO:0016887
Vifa4g00678 355 PANTHER ARSENICAL PUMP-DRIVING ATPASE ARSENITE-TRANSLOCATING ATPASE 12 342 IPR016300 GO:0005524|GO:0016887
Vifa4g00678 355 CDD ArsA 35 310 - -
Vifa4g00678 355 Coils Coil 326 353 - -
Vifa4g00678 355 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 309 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00678 Vifa-Chr4 193448043 193451423 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00678 K01551 - gmx:100816517 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00678 4 193448043 193451423 Vifa4g00678 4 193448043 193451423 ECH