Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00654 ATGGCGACGCCGAAACCGAAACGTAACTTCCCTCCGATAACGGAATGTAACGGAGTAACGTCGTCTTCTTCGCCGCGTGAAACCGTTGCGGCTGATCTTGACGGTACTCTTCTCATTTCTCGAAGCTCGTTTCCGTACTTCATGCTCGTCGCTGTTGAAGCTGGAAGCCTCCTCCGTGGCTTTATTCTACTGCTTTCTCTTCCGTTAGTCATCGTTTCTTATCTCTTCATATCTGAATCTCTCGGTATTCAGATACTGATTTTCATCTCCTTTGCCGGTCTCAAAATCCGCGATATCGAACTCGCTTCTCGTGCTGTGCTTCCAAGGTTTTATGCTGCGGATGTGAGGAGAGAGAGTTTTGAAGTGTTTGATCGGTGCAAACGGAAGGTAGTGGTGACGGCGAATCCGACTGTGATGGTGGATGTGTTTGTGAAGGATTATCTCGGCGGCGATAAGGTTTTGGGAACGGAGATCGAGGTGAATCCGAAGACGAAGAAGGCGACTGGATTCGTGAAGAAATCTGGTGTGCTTGTTGGAGATTTGAAGCGTTTGGCGGTTGTGAAAGAGTTTGGTGATGAATTGCCTGATATTGGACTTGGAGATCGAAAAACTGATCATGATTTCATGTCTATTTGCAAGGAAGGTTACATGGTGCCTCCAAGCAAATCAGCAAAACCAGTTCCTCTAGAGCGTCTAAAGAGCCGACTCATCTTTCACGACGGTCGCTTTGTGCAGCGTCCAGATCCGCTAAACGCCATCATCACCTTTGCCTGGATCCCATTCGGCTTCATCCTCTCCATCATCAGAGTCTACTTCAACCTCCCACTCCCTGAACGCATAGTTCGCTACACCTATGAAATGCTCGGTATCAAGCTTGTAATCAGCGGCCACCGTCCTCCGCCACCATCTCCAGGAACCCCAGGAAACCTCTACGTTTGCAACCACCGCACCGCCCTCGACCCCATCATCATTGCCATTGCCCTCGGCCGCAAAGTGTCATGTGTCACCTACAGCGTCAGCAAACTCTCCCGCTTCCTCTCACCAATCCCCGCCGTCGCCCTCACCCGTGACCGCGCAGCCGATGCAGCCCGCATCACTGAGATTCTCCAAAAGGGCGACCTTGTTGTGTGCCCAGAAGGAACCACATGTCGTGAACCTTTCTTGCTACGGTTCAGTGCTCTGTTCGCTGAGCTGAGTGATAGGATCGTCCCCGTAGCTATTGATTGCAAACAGAACATGTTCTTCGGGACCACTGTTCGTGGAGTCAAATTCTGGGACCCTTACTTCTTCTTCATGAATCCTAGGCCTGTTTATGAGGCTAGGTTCCTTGACCGGTTACCAGAAGAGATGTCTGTTAAGGCTGGTGGGAAATCTTCGATTGAGGTTGCTAATCATGTGCAGAAGGTTTTAGGTGATGTGCTTGGATTTGAGTGTACTGGTTTGACAAGGAAAGATAAGTATTTGTTGCTTGGAGGAAATGATGGGAAGGTGGAGTCCATGTATGGCGCCAAAAAGTGA 1518 0.4974 MATPKPKRNFPPITECNGVTSSSSPRETVAADLDGTLLISRSSFPYFMLVAVEAGSLLRGFILLLSLPLVIVSYLFISESLGIQILIFISFAGLKIRDIELASRAVLPRFYAADVRRESFEVFDRCKRKVVVTANPTVMVDVFVKDYLGGDKVLGTEIEVNPKTKKATGFVKKSGVLVGDLKRLAVVKEFGDELPDIGLGDRKTDHDFMSICKEGYMVPPSKSAKPVPLERLKSRLIFHDGRFVQRPDPLNAIITFAWIPFGFILSIIRVYFNLPLPERIVRYTYEMLGIKLVISGHRPPPPSPGTPGNLYVCNHRTALDPIIIAIALGRKVSCVTYSVSKLSRFLSPIPAVALTRDRAADAARITEILQKGDLVVCPEGTTCREPFLLRFSALFAELSDRIVPVAIDCKQNMFFGTTVRGVKFWDPYFFFMNPRPVYEARFLDRLPEEMSVKAGGKSSIEVANHVQKVLGDVLGFECTGLTRKDKYLLLGGNDGKVESMYGAKK 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00654 505 PANTHER ANCIENT UBIQUITOUS PROTEIN 27 499 - -
Vifa4g00654 505 SMART plsc_2 309 410 IPR002123 GO:0016746
Vifa4g00654 505 Pfam Acyltransferase 308 405 IPR002123 GO:0016746
Vifa4g00654 505 CDD LPLAT 285 443 - -
Vifa4g00654 505 FunFam Glycerol-3-phosphate 2-O-acyltransferase 6 111 230 - -
Vifa4g00654 505 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 224 495 - -
Vifa4g00654 505 MobiDBLite consensus disorder prediction 1 24 - -
Vifa4g00654 505 Pfam haloacid dehalogenase-like hydrolase 30 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00654 Vifa-Chr4 187556672 187560006 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00654 1 505 Acyl Lipid Metabolism Gene Families AT4G00400 80.198 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00654 K13508 - gmx:100794137 890.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00654 4 187556672 187560006 Vifa4g00654 4 187556672 187560006 ECH