Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00647 ATGAAAATGAAGATCAACAAAGCCGCCGATCTCTCCTCAATCTCCGTCTTCCCTCCTCCTCACATCTATTCAAGGAGGCCGAACAATGTATCGAATGGACTGCAAGCGTCGCAGCATCGATCGCAACCGTCTCAGCAATCGTTTTCTCAGGGATTGTCATCTCAGCAAGGAATTATGTCTCATTTCTCGCAAAGCTCGCTCGACGAAGCTATCACAGCAAATGATCAGAGAGCTGGTTCTCAAGAACATGAGAACTCTTCAAGGAGGTTTTCTAGTTTGCCTCGACTTGCTTTTCCGAAGGACGAGAGTCAACCACACAACTCAAGATCTTCATCCAATCTCCTGGTGAAATGGAACTCTGTAGATAATAAAAATCAGTTAAGTGAAGGACTCGAAACCCGAATTGGCATAATGGAAACCTCATTGAGCAGGTTTGCAATGATAATGGATTCTGTTCAAAGTGATGTAATGCAAGTTAACAAAGGAACAAAGGAAATTAATTTGGAGATGGAGTGCATAAGACAGAAGCTGATTGCTCAAGATAACTCGCTTCAGTTAATGATGAAAGGACAAGAAGAAATTAAAGCAAGCATTAATGAGAGCTTGAAATCTTTCTCTGAACAAATGAGCCACGTTACAAACATAGAGAAGTTACAGGAAGCATATATGTTGGTTTCAGCCATGCCTCAGCTAATTGAAGGCTCTCTGAAAAATTTGCAAAATGATATCCAGAACACCACCAAGGAAATGCAGGAAATCTCTCGCAGTTTAAAACATACTAACCAAAAGGATCTGGCACAGTCTATTCTGTCTCCAAAGTGTGTTAGCAAACAATTTATCACACCAAAAATGCATCAGCGTCCGGCTAATGAAGCAAAGATGTACACTCCAGCTATTGTAGCTTCAAAAGTAGACACGGGAGGCTGGTTGCCAGTAAAAAGAGAGAGAGTTACTTTTTCAGATAGAGTATCTGAGAAGGTGCAAAAGCAAACTCAACCATACACTGAGAAGATAAGGGGAGCAAGAAACTGTGCAATTGTCATTGAATCTGACGAGGAGACTGATGGAAAATTTTCCTGCGCGATTGAACTAAACGCAGTAGCAGCAAAGGGGAAGGGGAACAACAAACCAAAAATTACAAATGAGGCAATTCGCGTCAGCCAAATGGAGGGAACTAAGTTGGTTGCAAAAGATGGACAGGCAGCATTGAGGAGGAGTGCAAGGAAGAGACTCCCTAACCAAATGATGGCTGATTTTGTCTGTAAAGGGCATAAGAAAAAGAGTCATAGAAAAAAGGGCATGTTTGATCTGTAG 1314 0.4178 MKMKINKAADLSSISVFPPPHIYSRRPNNVSNGLQASQHRSQPSQQSFSQGLSSQQGIMSHFSQSSLDEAITANDQRAGSQEHENSSRRFSSLPRLAFPKDESQPHNSRSSSNLLVKWNSVDNKNQLSEGLETRIGIMETSLSRFAMIMDSVQSDVMQVNKGTKEINLEMECIRQKLIAQDNSLQLMMKGQEEIKASINESLKSFSEQMSHVTNIEKLQEAYMLVSAMPQLIEGSLKNLQNDIQNTTKEMQEISRSLKHTNQKDLAQSILSPKCVSKQFITPKMHQRPANEAKMYTPAIVASKVDTGGWLPVKRERVTFSDRVSEKVQKQTQPYTEKIRGARNCAIVIESDEETDGKFSCAIELNAVAAKGKGNNKPKITNEAIRVSQMEGTKLVAKDGQAALRRSARKRLPNQMMADFVCKGHKKKSHRKKGMFDL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00647 437 MobiDBLite consensus disorder prediction 15 59 - -
Vifa4g00647 437 MobiDBLite consensus disorder prediction 25 59 - -
Vifa4g00647 437 Coils Coil 236 263 - -
Vifa4g00647 437 PANTHER RECOMBINATION INITIATION DEFECTS 3-RELATED 281 402 IPR034546 GO:0048236|GO:0070192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00647 Vifa-Chr4 185489708 185493421 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00647 - - mtr:11444577 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00647 4 185489708 185493421 Vifa4g00647 4 185489708 185493421 ECH