Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00639 ATGTCATTTTTATGTGGGCTTCCTATACTTGAGTGTGTTTATTGTTTGGGTTGTACTAGGTGGGTTTGGAAAAAATGTCTGTATACTGCTGGCTATGAGAGTGAAAATTGGGGTCTGGCTACTGCGGAAGAGTTCGAGCCTATACCGCGTTTTTGTCGCATGATCTTAGCTGTTTACGAAGATGATATTCGTAACCCTCAGTGGGCTCCGGAAGGGGGTTATGGGATTAATCCGGATTGGATAATCTTGCGGAAGGATTACGGGGATAACCAAGGGTGTGTTACTCCTTATATGATATACGTTGATCATGATCGCGGGGAGATTATACTTGCGGCAGCCGAGTGGGTCTTTGATGCAGAATGGGAGGTTTTGAGGAAGCTAATAGCAGAGTACCCGACTTATATGCTGACATTTGTTGGACATTCGCTTGGGGCTGGGGTGGTGGCGTTATTGACAATGATAGCGCTTCACAATCGCGAGAAATTGGGGTTACTGAGAAACAAGATAAAATGCTATGCGATTGCTCCTGCTCGATGCATGTCTCTCAATTTGGCTGTAAGATACGCAGATGTGATCAATTCTATTGTACTACAGGATGATTTTTTACCCCGGACAACCACTGCTATGGAAACCGTCTACAGGTCGCTTTTATGTTGGCCTTGTTTATTGTGTCTCTTGTGCTTAAAGGATACTTGCACGCTGGAGGAGAAGAAGCTTAGAGACCCAAGGCGTCTGTACGCACCTGGTCGTCTCTATCACATTGTGGAGCGGAAGCCCTTCAGGTTTGGAAGATTTCCACCGGTTGTTAGGACAGCCGTACCTGTTGATGGGAGGTTTGATCATATAGTTCTTTCTTGCAATGCGACTTCTGACCATGCCATCCTTTGGATCGAGAGGGAATCCCGACAGGCGCTCGATTTAATGCTAGAGAAAGATCGGCATATGGATATTCCGGCAGAGCAGAAGATGGTGAGGCAAAAATCTCTAGCTCGTGAACACAGTCAAGAGTATCGCGCAGCCCTTCAGAGAGCAGTTGCTTTGGATATTCCTCAAGCATACTCACCTTCCTCATATGGAACATTTCATGAAATTGACATTGAGGAAGATTCCGGAAGATCTAGTGGCAAAAGCTCCTCCTTGTCTCACGAGAAACAATCGGAAGGTTGGAATGAATTTGTCGGGCGCATGTTTGAAGTGGATGACACAGGTCAAATGGTGTTCAAGAAGACAACTCCTTAA 1239 0.4576 MSFLCGLPILECVYCLGCTRWVWKKCLYTAGYESENWGLATAEEFEPIPRFCRMILAVYEDDIRNPQWAPEGGYGINPDWIILRKDYGDNQGCVTPYMIYVDHDRGEIILAAAEWVFDAEWEVLRKLIAEYPTYMLTFVGHSLGAGVVALLTMIALHNREKLGLLRNKIKCYAIAPARCMSLNLAVRYADVINSIVLQDDFLPRTTTAMETVYRSLLCWPCLLCLLCLKDTCTLEEKKLRDPRRLYAPGRLYHIVERKPFRFGRFPPVVRTAVPVDGRFDHIVLSCNATSDHAILWIERESRQALDLMLEKDRHMDIPAEQKMVRQKSLAREHSQEYRAALQRAVALDIPQAYSPSSYGTFHEIDIEEDSGRSSGKSSSLSHEKQSEGWNEFVGRMFEVDDTGQMVFKKTTP 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00639 412 CDD Lipase_3 44 204 - -
Vifa4g00639 412 Gene3D alpha/beta hydrolase 109 216 IPR029058 -
Vifa4g00639 412 Pfam Lipase (class 3) 108 206 IPR002921 GO:0006629
Vifa4g00639 412 SUPERFAMILY alpha/beta-Hydrolases 41 206 IPR029058 -
Vifa4g00639 412 MobiDBLite consensus disorder prediction 368 387 - -
Vifa4g00639 412 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 110 410 - -
Vifa4g00639 412 Pfam Lipase 3 N-terminal region 10 74 IPR005592 GO:0016042
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00639 Vifa-Chr4 182178879 182182625 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00639 1 409 Miscellaneous Gene Families AT4G00500 58.575 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00639 - - gmx:100800227 671.389