Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00635 ATGTACCATCCCAATAACCACCTCAAACCACCCACAAAACCAAACCTAACTTCCCAATTCACCCCAAAATGCCCTTATCACCTAACCCTCCCGTTTCTCCCATCTCCCAAACCCTTCAAACTCCCCATCCTAACATGCTTCTCCTCACCAACCAAAACCCTATTCTCAATCCTACGCACAATCCCCGACTGGGCCGACCAAACCCAAGAACGCGGAATGCAAAAAAACCGAACCCTCTACAACCACACAGACTGGGTCCAACACCGTTCCTCCCTCCGTCACGTGCGTCACTTTTTCTCTAGTCTCTCCTCACGTGTCATCCTCTCTCTTGTTCCCCCCGTTCTCTTCTTCACCTCCTTCGCAGCTGCTATTGCCACGTATAACTCCGCCGTCTACTTCCAGTTGTTGCCCGAGTTTTTTCCTGTCTTTAGAGCTTCTTCGCTGCCGTATCAGCTTACTGCGCCCGCGCTTGCGCTGTTGCTGGTTTTTCGGACGGAGGCTTCTTATAGTAGGTTTGTGGAAGGGAAGAAGGCTTGGACTTCGGTTATTGCGGCTGCCAATGATTTCGCCAGGCTTGTTATGGCTGTTGTTGATACAGGGACTCAATCTGAGTATGACCTCAAGAATGGCCTTTTGAATTATATTATTGCTTTTCCTCTTGTTCTTAAGTGTTATGTGTTGTATGGTTCAGACATTGAGAGAGATCTTCAACATTTGCTAGAAGTAGATGATATAGCATTGATCATGAAATCGAATCATCGACCCCGCTGTGTTATTGAGTTTATATCGCAAAGCATTCGGCTACTAAAATTGGAGGATTCTAGAAGAAATATCCTGGAATCAAAGATCACTTGTTTCCATGAAGGAATTGGCTTATGCGAACAGCTTAAGGGTATTCCTATTCCGTTATCATATACACGCTTGACTTCAAGGTTTCTTGTCCTATGGCATCTGACTCTACCTATCATACTTTGGGATGAATGTCACTGGATTGTGGTTCCTGCTACCTTTATCAGTGCTGCCTCTTTGTTCTGCATTGAAGAAGTTGGAGTTCTTATAGAGGATCCATTTCCAATGCTTGCGCTTAATGATCTCTGCCAAAAGGCCCAGAATGACATCCAAGAAGCAATTGCAACCGAAAGTGTAATTCATGCACACCTCGCTGCAAAGCAAAACTACCAGTCTAAAGAACATTCACCAAATGGCCGGCCTACCTCCTAA 1221 0.4554 MYHPNNHLKPPTKPNLTSQFTPKCPYHLTLPFLPSPKPFKLPILTCFSSPTKTLFSILRTIPDWADQTQERGMQKNRTLYNHTDWVQHRSSLRHVRHFFSSLSSRVILSLVPPVLFFTSFAAAIATYNSAVYFQLLPEFFPVFRASSLPYQLTAPALALLLVFRTEASYSRFVEGKKAWTSVIAAANDFARLVMAVVDTGTQSEYDLKNGLLNYIIAFPLVLKCYVLYGSDIERDLQHLLEVDDIALIMKSNHRPRCVIEFISQSIRLLKLEDSRRNILESKITCFHEGIGLCEQLKGIPIPLSYTRLTSRFLVLWHLTLPIILWDECHWIVVPATFISAASLFCIEEVGVLIEDPFPMLALNDLCQKAQNDIQEAIATESVIHAHLAAKQNYQSKEHSPNGRPTS 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00635 406 Coils Coil 359 379 - -
Vifa4g00635 406 PIRSF UCP016988 13 406 IPR024701 GO:0005247|GO:0042548
Vifa4g00635 406 PANTHER UPF0187 PROTEIN YNEE 73 395 IPR044669 -
Vifa4g00635 406 Pfam Bestrophin, RFP-TM, chloride channel 88 365 IPR021134 GO:0005254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00635 K08994 - gmx:100790216 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00635 4 181389804 181391577 Vifa4g00635 4 181389804 181391577 ECH