Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00618 ATGAAGACATGGATTTCCTTCTCCACCACCATCCTCATTATCTTTGTTACAAGCTCTTTCATCTTGGAAATTGATCTTACCAAAATAACAAGCACAACTATTTTGAAGACAATTCAAGTCTTCAACAACAAACAACAACCTCAGTTCCCACTAAATTGCAACATTACAACATGTCTATCAAACTACCCAACAACATTTCAACCAAATGATTACTCATCATCCTCATCATCATGTCCACATTACTTCAAATGGATCCATGAAGATCTCAAACCATGGGAGAAAACAGGAATCACAAGAGAAATGGTTGAAAAAGGCCAAAACCTATCACATTTTCGCCTTGTGATTGTGAATGGAAAATTGTACATAGAAAAATTTGAAAAATCTTTTCAAACAAGAGACATTTTCACAATATGGGGAATCTTACAGCTTTTAAGATTGTACCCTGGAAAAATACCTGATTTGGAATTAATGTTTCAATGTGGTGATAAAACTGTTGTGGTTAAAAGTAACTTTCAAGGACCAGAAGTTTCACCTCCACCTATTTTTCATTACTGTGGAAAGGAAAATTATTATGATATTGTTTTTCCTGATTGGACTTTCTGGGGTTGGGCTGAACTCAACATAAGACCATGGGAAACAACATTGCATAACATACAAGAAGGCAACAAGAATGTCAACTGGGAGGATAGAATACCTTATGCATATTGGAAGGGCAATCCATCCGTATGTAGCATTCGAAAAGAACTCGTCAAGTGTAACGCCTCCGACGAACTCGATTGGAATGCTCGAATATTTGACATCCATTGGAAAGAAGAGAAATCCAAAAGTTTCAATGACACGAAATTGGAAAATCAATGTACCTATAGGTACAAGATTTATGCAGAAGGAGCAACATGGTCAGTGAGTGAAAAGTACATAATAGCATGTGACTCGATGACAATGTTCATAGAGCCTAGATACTATGATTTTTTCACAAGAAGCATGCTACCTTTGCAGCACTATTGGCCTATAAGCATCAAAAACATGTGTGAAGATATTAAATTTGCAGTGGATTGGGGCAACACTCACCTTGATAGTGCACAGACAATAGGAGAAGGAGGAACCAAGTATGTAACAGAAAATTTAAAGATGAAGTTTGTTTATGATTACATGTTTCATCTATTGAGTACTTATGCAAAGCTTATGAGATTCGAACCGAAAGTACCGGAAGGAGCAGTTGAGGTTTGTGCTGAAAGTGTGGCATGTTCTTTGCGTGGTGTAAGGAAACATTTCTTGACTGAGAGTATGGTCGTGTCACCAAGTGATGAACCTCCATGCACAATGCCTTCTCCTTATACGAATGAAACTCTTCATCAATTTCTACAAGAGAAGGAGGATTTGATAAGACAAGTGAAGACAAGGGCAATGAATAAAAAGTTATAG 1422 0.3699 MKTWISFSTTILIIFVTSSFILEIDLTKITSTTILKTIQVFNNKQQPQFPLNCNITTCLSNYPTTFQPNDYSSSSSSCPHYFKWIHEDLKPWEKTGITREMVEKGQNLSHFRLVIVNGKLYIEKFEKSFQTRDIFTIWGILQLLRLYPGKIPDLELMFQCGDKTVVVKSNFQGPEVSPPPIFHYCGKENYYDIVFPDWTFWGWAELNIRPWETTLHNIQEGNKNVNWEDRIPYAYWKGNPSVCSIRKELVKCNASDELDWNARIFDIHWKEEKSKSFNDTKLENQCTYRYKIYAEGATWSVSEKYIIACDSMTMFIEPRYYDFFTRSMLPLQHYWPISIKNMCEDIKFAVDWGNTHLDSAQTIGEGGTKYVTENLKMKFVYDYMFHLLSTYAKLMRFEPKVPEGAVEVCAESVACSLRGVRKHFLTESMVVSPSDEPPCTMPSPYTNETLHQFLQEKEDLIRQVKTRAMNKKL 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00618 473 Pfam Glycosyl transferase family 90 74 466 IPR006598 -
Vifa4g00618 473 SMART cap10 150 398 IPR006598 -
Vifa4g00618 473 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 43 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00618 Vifa-Chr4 177020201 177022683 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00618 - - gmx:100813234 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00618 4 177020201 177022683 Vifa4g00618 4 177020201 177022683 ECH