Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00603 ATGAACAAGGACAATGAAACATATCTCAAACTTTTTCAACGAGGTTCTTCTAATAATCATCTCAAGAGTAGTTTGATCTCCAAAAAAGCTAAAGTTACCACCACTGTAGTTGCTCTCTTTTGCTTAGTAGTAACTTTTTGTTACTATTTTGCAGCCTCCAATAATAAGATAATTTCAGATGATTATTTCATTCGAAATCAAAACCCTTCATCAATCCAAACAAACAAACACGAAAAACAAGAATATCCACTTACATGCACCAAAGGAAACAAAACTGAGACACAAACATGTCCAAGAGACCAGTTTCCTACAAAACACAACCCAACAAGTCAATATAGCCATGTTTGTCCCTCATACTTTAGATGGATCCATGAAGATCTAAAGCCATGGAAAGAGAAAGGAATCACAAAGGAAATGGTGGAAGAAGCAAGAAGAACAGCACACTTTAAGATTGTGATAGTGGATGGAAAATTGTATGTGGAGAAGTATAGGAAGTCAATTCAAACAAGAGATGTGTTCAGTTTGTGGGGTATTTTGCAACTATTAAGATTGTATCCTGGGAAGTTGCCGGATTTGGAACTCTTGTTTGATTGTGATGATAGGCCTGTTGTTCCTTCGGATAAGTTTCATGGCCCAAATGCTTCACCACCACCTTTGTTTAGATATTGTTCTAATCAATGGAGTTTGGATATTGTGTTCCCTGATTGGTCCTTTTGGGGATGGGCTGAGATAAACATAAAGCCATGGAAAGATACTTTGAAAGATATAAAAGAAGGGAACAAAAGGACTAAGTGGAAGGATAGAGTACCTTATGCTTATTGGAAGGGGAACCCTTATGTTGCTCAAACTAGGAAGAATCTTTTGAAATGCAATGTTACATCCCAAAATGATTGGAACACTCGTCTATACATACAAGACTGGGTAAAAGAATCCAATGAAGGTTACAAAAAATCCGGCTTAGGGAACCAATGCACCTATAGGTACAAGATATACATCCAAGGATATGCTTGGTCTGTTAGTGAGAAATACATTTTGGCATGTAATTCCATGACATTATATGTAAAATCCGAGTACCATGATTTTTTCATGAGAGGCATGGTTCCATTGCAACACTATTGGCCCATTAGAGACAATTCAAAATGCACCTCTCTTAAGTATGCTGTAGAATGGGGCAACAATCATACTGATAAGGCACAAGCAATAGGAGAGGCTGCTAGCAGATTCATACAAGAGGACTTAAACATGAACAATGTATATGATTACATCTTTAATCTTCTCAATGAATATGCAAAACTTTTAAGGTTCAAACCAACTATACCTCAAGGAGCTGTGGAATTTTGTTCTGAAACAATGGCATGTGATTTAAATGGTATAGAAAGGAAGTTCATGGAGGAATCAATGGTTATGTTTCCTAGTGATTCAAATCCATGCACTATTCCTCCACCATATGATCCTTTAACTTTACAAGAAGTTTTAGAGAGAAATGTTAATTCAACAAGACAGGTGGAAATTTGGGAAGATGAATATTGGTTGAATAAGAATAATGGACAATAG 1554 0.3636 MNKDNETYLKLFQRGSSNNHLKSSLISKKAKVTTTVVALFCLVVTFCYYFAASNNKIISDDYFIRNQNPSSIQTNKHEKQEYPLTCTKGNKTETQTCPRDQFPTKHNPTSQYSHVCPSYFRWIHEDLKPWKEKGITKEMVEEARRTAHFKIVIVDGKLYVEKYRKSIQTRDVFSLWGILQLLRLYPGKLPDLELLFDCDDRPVVPSDKFHGPNASPPPLFRYCSNQWSLDIVFPDWSFWGWAEINIKPWKDTLKDIKEGNKRTKWKDRVPYAYWKGNPYVAQTRKNLLKCNVTSQNDWNTRLYIQDWVKESNEGYKKSGLGNQCTYRYKIYIQGYAWSVSEKYILACNSMTLYVKSEYHDFFMRGMVPLQHYWPIRDNSKCTSLKYAVEWGNNHTDKAQAIGEAASRFIQEDLNMNNVYDYIFNLLNEYAKLLRFKPTIPQGAVEFCSETMACDLNGIERKFMEESMVMFPSDSNPCTIPPPYDPLTLQEVLERNVNSTRQVEIWEDEYWLNKNNGQ 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00603 517 Coils Coil 488 508 - -
Vifa4g00603 517 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 68 510 - -
Vifa4g00603 517 SMART cap10 188 436 IPR006598 -
Vifa4g00603 517 Pfam Glycosyl transferase family 90 113 506 IPR006598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00603 Vifa-Chr4 173463093 173465301 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00603 - - gmx:100790123 760.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00603 4 173463093 173465301 Vifa4g00603 4 173463093 173465301 ECH