Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00582 ATGGCAGAACCAGAAACAACAAAAAGGTATGCAGTTGTTACAGGAGCAAACAAAGGAATAGGATTTGCAGTATGCAAACAATTGGCTTCTAAAGGGGTCACTGTTGTGCTTACAGCAAGAGATGAAAATAGAGGTCTTGAAGCTGTTGACAAATTGAAGCAACTTTATCTACCTGACCTTGTGATTTTTCATCAACTTGATGTCACAGATCCTGCAAGTATAACATCATTTGCAGATTTTATCCAGAATCAATTTGGAAAACTTGATATCTTGGTAAACAATGCTGGAATTCCTGGAATTAACGTGGACGGTGAGGCCCTGGTTGCTGCTAAAGCTTTGCAGGAAAATGGTGGCCAGATTGATTGGAGTAAAATAATAACTGAGAGCTATGAACAAACTGAAGCAGGTTTTAAAACAAACTACTATGGAGCTAAGGAATTAACCGAAGCGCTTATTCCCCTTCTACAGCTTTCAACTTCACCAAGAATTGTCAATGTTTCCTCATCCATGGGAAAGTTAGAGAAAATTCCGAATGGATGGCCTAAGGAAGTACTAAGTGATGTTGGAAACCTTACTGAAGAAAAGATTGATGAAGTTATGAACAAATTTCTAAAGGATTTTAAAGAGGGTTCAATAGTAGAAAATAAAGATATAAACTACAATACAGGTTATTTGACACCTGATGAAGGTGCTGAATCGATTGTGAGGTTGGCATTGTTCCCTGATGGGAGTCCTTCTGGCTGCTTTTTTGTTAGAAATGAAGAGAAACCATTTTGA 777 0.3784 MAEPETTKRYAVVTGANKGIGFAVCKQLASKGVTVVLTARDENRGLEAVDKLKQLYLPDLVIFHQLDVTDPASITSFADFIQNQFGKLDILVNNAGIPGINVDGEALVAAKALQENGGQIDWSKIITESYEQTEAGFKTNYYGAKELTEALIPLLQLSTSPRIVNVSSSMGKLEKIPNGWPKEVLSDVGNLTEEKIDEVMNKFLKDFKEGSIVENKDINYNTGYLTPDEGAESIVRLALFPDGSPSGCFFVRNEEKPF 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00582 258 Gene3D - 2 258 - -
Vifa4g00582 258 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 244 IPR036291 -
Vifa4g00582 258 PRINTS Glucose/ribitol dehydrogenase family signature 86 97 IPR002347 -
Vifa4g00582 258 PRINTS Glucose/ribitol dehydrogenase family signature 10 27 IPR002347 -
Vifa4g00582 258 PRINTS Glucose/ribitol dehydrogenase family signature 155 171 IPR002347 -
Vifa4g00582 258 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 216 256 - -
Vifa4g00582 258 Pfam short chain dehydrogenase 10 173 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00582 Vifa-Chr4 166328550 166329909 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00582 1 179 Acyl Lipid Metabolism Gene Families AT3G55290 28.261 5.16e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00582 K15095 K26488 gmx:100803877 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00582 4 166328550 166329909 Vifa4g00582 4 166328550 166329909 ECH