Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00557 ATGACTACAAAACCTTCTCTCTCCACCACCACTACCGCCACCACCACCGTGCTTGAAACTGCGGCGGCTAAAATAACTCCGGAAATGGACCCAAAATCCGTTTCCGAGACTCAAAGTTTTTTCAAGGTTATGAGTAGTGGCGCTCCCGTTCCTGAAAACTGCAACACCGATGGCTTCTTTGATTCTTTCCTTCGGCATTTCATCAAAGTCGATCAAATTCAACCTGGTCGAATCTCTTGTACTCTTGTCGCCAAACCACCTCTCTGTAATGGCTATGGAACACTGCATGGAGGGTCTGTTGGGGCATTGGTTGAGGTTCTGTCAACTGCTTGTGCTAGAACTGTTGTTGCTGAGGACAAACAACTTTTTCTTGGGGAAATTAGCATCTCTTATCTCTCCGCCACTCCAATAAATGAAGAAGTGGTAGCTAATGCTTCTGTGGTGAAGAGTGGAAGAAATTTAACTGTAGTTGCACTTGAGTTCAAATTGAAGAAAACTGGAAATTTGCTTTATCTCACTCATGCAACCTTCTTTAACATGCCGGTTTCCAACTTATGA 558 0.4409 MTTKPSLSTTTTATTTVLETAAAKITPEMDPKSVSETQSFFKVMSSGAPVPENCNTDGFFDSFLRHFIKVDQIQPGRISCTLVAKPPLCNGYGTLHGGSVGALVEVLSTACARTVVAEDKQLFLGEISISYLSATPINEEVVANASVVKSGRNLTVVALEFKLKKTGNLLYLTHATFFNMPVSNL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00557 185 NCBIfam hotdog fold thioesterase 68 160 IPR003736 -
Vifa4g00557 185 CDD PaaI_thioesterase 68 178 - -
Vifa4g00557 185 PANTHER THIOESTERASE SUPERFAMILY MEMBER-RELATED 31 181 IPR039298 GO:0047617
Vifa4g00557 185 FunFam Putative esterase F42H10.6 48 180 - -
Vifa4g00557 185 Pfam Thioesterase superfamily 92 166 IPR006683 -
Vifa4g00557 185 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 68 177 IPR029069 -
Vifa4g00557 185 Gene3D Hotdog Thioesterase 48 181 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00557 K17362 - gmx:100499764 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00557 4 157846079 157850462 Vifa4g00557 4 157846079 157850462 ECH