Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00538 ATGGAAGGAAAACAACAAGCACACACGTTAGAAATCAACATTATTTCTGGACAACACATAAGCGTAGATCAAAATTTACAGGCAGAGGATGCATATGTTGTTGTTCGTGCCGAATCTCTCAACTCATGCACTACAAAAATGGCGAAAGAGAGTGAGGGTTTACTTTCATGGAATGAAAAATTCATGTTAGATATTCACCCACATGCAAAGTCAGTGACCTTTGAAGTACAATGCAAAAAGTACAAAGGAATTCGTCCCATTGGAGTGACTAGGATAGCACTTTCTGATTTATTTGGTGAGAATGTTTCGTTGCAAAGTTGTGATCAAACTTTGAGTTATGAGTTGAGAGATTGGGATGGTAGGAAAAATGGTGTTATTAACTTTTCTGTAAGGAGGGTGACACAAGAGGACAATATAAAAAAACAGCAGAAACAATTTCTTTGGGATTCGAAGATTGTTCGAGTGAACTGA 471 0.3737 MEGKQQAHTLEINIISGQHISVDQNLQAEDAYVVVRAESLNSCTTKMAKESEGLLSWNEKFMLDIHPHAKSVTFEVQCKKYKGIRPIGVTRIALSDLFGENVSLQSCDQTLSYELRDWDGRKNGVINFSVRRVTQEDNIKKQQKQFLWDSKIVRVN 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00538 156 SMART C2_3c 9 106 IPR000008 -
Vifa4g00538 156 ProSiteProfiles C2 domain profile. 1 111 IPR000008 -
Vifa4g00538 156 Pfam C2 domain 9 100 IPR000008 -
Vifa4g00538 156 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 134 IPR035892 -
Vifa4g00538 156 Gene3D C2 domain 3 151 IPR035892 -
Vifa4g00538 156 PANTHER INGRESSION PROTEIN FIC1 8 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00538 Vifa-Chr4 149816502 149817226 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00538 - - psat:127135632 219.55