Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00537 ATGCAAGGAAAACAACAAGCATGCAAATTAGAAATCACCATTATTTCTGGACAAAACATAAGTGTGGATGGAAATTCTAAGACAGAGGAACTATCTGTTGTTGTTCGTGCCGAGTCTCTAGACTCTTGCGCGACGAAAATGGTGAAGGAAAGTGAAGGTTTACTTTCATGGAATGAAAAGTTCATGTTAGATATTCACCCACATGCAAAGTCAGTGACCTTTGAAGTACAATGCAAAAAGTACAAAGGAACTCGTCCCATTGGGGTGGCTAGGATAGCACTTTCTGATTTATTTGGTGAGAATGTTTCGTTGCAGAGTTGTGATCAAACTTTGAGTTATGGGTTGAGAGATTGGGATGGTAGGAAAAATGGTGTTATTAATTTTTCTGTAAGGAGGGTGATTCAAGAGGATAATTTATGTTTTGAAAAAGAACAAGGTAAGGACATAAAAATGGTGAGTTCAAGTAGATTTGAGGATGTGGGGTTTAAGGTGCAGATAAGGAAAATTCAAGCCATGTTGTCATTGAGATTTCAATTTCTTCTGTCATGTTTCTCTTAG 558 0.3746 MQGKQQACKLEITIISGQNISVDGNSKTEELSVVVRAESLDSCATKMVKESEGLLSWNEKFMLDIHPHAKSVTFEVQCKKYKGTRPIGVARIALSDLFGENVSLQSCDQTLSYGLRDWDGRKNGVINFSVRRVIQEDNLCFEKEQGKDIKMVSSSRFEDVGFKVQIRKIQAMLSLRFQFLLSCFS 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00537 185 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 131 IPR035892 -
Vifa4g00537 185 Pfam C2 domain 9 100 IPR000008 -
Vifa4g00537 185 PANTHER INGRESSION PROTEIN FIC1 9 132 - -
Vifa4g00537 185 ProSiteProfiles C2 domain profile. 1 111 IPR000008 -
Vifa4g00537 185 SMART C2_3c 9 106 IPR000008 -
Vifa4g00537 185 Gene3D C2 domain 7 132 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00537 Vifa-Chr4 149753080 149753637 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00537 - - psat:127135632 318.546