Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00127 ATGGATCCCTCATCTTCGACCTCACTCCCACAGTCTCTCCATCTCGCCATGGCCGCGTTACTCGGAGCCTCTTTCATGGCCATTTCCGCATTTTACATCCACCGCCGTACCGTCGACCATATCCTCCACCGCATCCTCGAAATCCGCCGCGCACCGCTTGGTTCCATCACCGATGAAGCTTCCTCTGGCGAGGAACAGGAAGAGAACTACGACGATGAACCGAGCGAGTTCGACGGGGAGGAAATGGAACCGGTTACCGATTCGAGAAACTATCACGGAGCGTTGTCGAGGTCCGTGGATGAGAGTAGTATGAACTTGCTTCGAAACTATAGAGTTTCGTCTTCCATGCCGGACGTTGTTTCTGCAACCGAATGGTTCCGTGATCATCCGATGAACCGTTCGTCCTCTCATGAGAATCTTAATTCTGTTCCGATTGGGCTTCCGTCTTTGAGAATGAGCTCGAAGCATGATGGTGCTCAGATTTCGAGTTCTTATAAGAGGATAGGTTCTGTTGGTAGAATTAAGACTCCGATATCACCGGGACGTAATGCCTTTGAAAGTGCTGAGGATTCTGATGATGATGATGATGATGGAACACAGCTTGGTGATGATAGTCAGATTCCCTTCTACCCTGTGACTATAGATTCTTCAAATTCTTATGGACTTAATCCAACCGTTCCTTTCAGAGCTGATGATGTAAATTGTGCAAAAAATCAGAAGTTTGGAGAAGTTTCGAAAGAAGCAGGAGCTGGTGCAGATATGAATGGTGGAATAACAGATTCAACTACAGTACATGCAGCTGGGAATGACCTTGTGTTTGTCAATAATGTCTTGTCTGCAAGAAGCGCAGCACTTGAGCCATTGAATATTGAAGAGGAGGAAGTTTGCAAGATGATGCGAGAATGCTTAGATTTGCGTAAGAAATATGTTTACAAGGAAAATGTTCCGTGGAAGGCTGAACCTGTCGAAACTAACTCTGATCCATTTCACTTTGAACCAGTTGAAGCATCAGGACACCACTTTAGGATGGAAGATGGAGTTGTACGTGTTTTTGCAAGTCGAACTGACACGGAAGAGCTATTCCCTGTTGCAAGCGCAACACATTTTTTTACTGATATGGATTACATTCTTAAAGTTATGTCTATTGGGAATGTTCGCTCTGCATGCTACCACAGGCTACGATTTCTTGAGGAAAAATTCCGCCTTCATCTGTTACTGAATGCAGATAGGGAGTTTGTTGCCCAGAAAAGTGCACCACACCGAGACTTCTACAATATCCGAAAAGTTGATACTCATATTCATCATTCTGCGTGCATGAATCAAAAGCATCTCCTGCGCTTCATCAAGTCAAAATTAAGAAAAGAACCTGATGAGGTTGTTATATTTAGAGATGGAAAGTACATGACACTTAAGGAGGTGTTCGAGAGTTTGGATTTGACTGGATATGATCTGAATGTGGATTTGTTAGATGTTCATGCAGATAAGAGCACATTTCATAGATTTGACAAATTCAACCTAAAGTATAACCCTTGTGGACAGAGTAGACTTAGAGAGATATTTTTAAAGCAGGATAATCTTATTCAGGGAAGGTTTCTGGCTGAAGTTACTAAGCAAGTTTTGTTAGATCTTGAAGCGAGTAAATATCAGATGGCCGAGTACAGGATCTCTGTTTATGGAAGAAAACAGAGCGAGTGGGATCAGCTGGCAAGTTGGTTTGTTAACAATGCTCTTTATAGTAAGAATGCCGTATGGCTAATCCAGTTACCACGGCTATATAATATCTACAGGAGTATGGGAATTGTTACCTCCTATCAGAATATTCTGGATAATGTGTTCATTCCTCTTTTTGAAGCCACTGTAGATCCAAACTCTCATCCTCAATTACACTTGTTTCTGATGCAGGTGGTTGGATTTGATCTTGTAGACGATGAAAGTAAACCTGAAAGGCGTCCAACTAAGCACATGCCTACTCCATCTGAGTGGACTAATGAATTCAATCCAGCATACTCTTATTACCTATATTACTGCTATGCAAACTTGTACACACTCAACAAGCTTCGTGAATCTAAAGGAATGACAATAATAAAGTTGCGGCCTCATTGTGGAGAGGCAGGTGATAGTGATCATTTGGCTGCTGCCTTCCTCCTATGCCATAACATTTCTCATGGCATAAATCTACGGAAGACTCCTGTTTTACAATATTTATATTACCTTGCGCAGGTTGGATTGGCTATGTCGCCGCTTAGCAATAATTCCCTTTTCTTGGACTATCACCGCAATCCTTTGCCCATGTTTTTCCAGCGAGGACTGAATGTCTCTCTATCTACCGATGATCCTTTGCAAATTCATTTGACAAAAGAGCCATTGTTAGAAGAATATAGTGTTGCAGCGAAGGTATGGAAACTCTCTGCTTGTGACCTGTGTGAGATAGCTAGAAATTCTGTTTACCAATCTGGATTTTCACATGAAGCCAAGTTACACTGGCTAGGGGATAAATATTTCTTGAGAGGTTCTGAAGGAAATGACATTCACAAGACAAATGTTCCGAGTTTGAGGATCTCTTTCCGATATGAGACATGGAAGGATGAAATGCAATATATTTACTCTGGTCAAGCCACCTTTCCCGAAGATGTAGATCCATAA 2643 0.423 MDPSSSTSLPQSLHLAMAALLGASFMAISAFYIHRRTVDHILHRILEIRRAPLGSITDEASSGEEQEENYDDEPSEFDGEEMEPVTDSRNYHGALSRSVDESSMNLLRNYRVSSSMPDVVSATEWFRDHPMNRSSSHENLNSVPIGLPSLRMSSKHDGAQISSSYKRIGSVGRIKTPISPGRNAFESAEDSDDDDDDGTQLGDDSQIPFYPVTIDSSNSYGLNPTVPFRADDVNCAKNQKFGEVSKEAGAGADMNGGITDSTTVHAAGNDLVFVNNVLSARSAALEPLNIEEEEVCKMMRECLDLRKKYVYKENVPWKAEPVETNSDPFHFEPVEASGHHFRMEDGVVRVFASRTDTEELFPVASATHFFTDMDYILKVMSIGNVRSACYHRLRFLEEKFRLHLLLNADREFVAQKSAPHRDFYNIRKVDTHIHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGKYMTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLAEVTKQVLLDLEASKYQMAEYRISVYGRKQSEWDQLASWFVNNALYSKNAVWLIQLPRLYNIYRSMGIVTSYQNILDNVFIPLFEATVDPNSHPQLHLFLMQVVGFDLVDDESKPERRPTKHMPTPSEWTNEFNPAYSYYLYYCYANLYTLNKLRESKGMTIIKLRPHCGEAGDSDHLAAAFLLCHNISHGINLRKTPVLQYLYYLAQVGLAMSPLSNNSLFLDYHRNPLPMFFQRGLNVSLSTDDPLQIHLTKEPLLEEYSVAAKVWKLSACDLCEIARNSVYQSGFSHEAKLHWLGDKYFLRGSEGNDIHKTNVPSLRISFRYETWKDEMQYIYSGQATFPEDVDP 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00127 880 ProSitePatterns Adenosine and AMP deaminase signature. 773 779 IPR006650 GO:0009168|GO:0019239
Vifa4g00127 880 NCBIfam AMP deaminase 337 867 IPR006329 GO:0003876|GO:0032264
Vifa4g00127 880 FunFam Probable amp deaminase 516 863 - -
Vifa4g00127 880 CDD AMPD 369 864 IPR006329 GO:0003876|GO:0032264
Vifa4g00127 880 Gene3D - 339 863 - -
Vifa4g00127 880 Gene3D - 439 529 - -
Vifa4g00127 880 MobiDBLite consensus disorder prediction 56 89 - -
Vifa4g00127 880 MobiDBLite consensus disorder prediction 173 209 - -
Vifa4g00127 880 Pfam AMP deaminase 312 867 IPR006329 GO:0003876|GO:0032264
Vifa4g00127 880 MobiDBLite consensus disorder prediction 61 81 - -
Vifa4g00127 880 PANTHER AMP DEAMINASE 281 872 IPR006329 GO:0003876|GO:0032264
Vifa4g00127 880 FunFam AMP deaminase 439 529 - -
Vifa4g00127 880 SUPERFAMILY Metallo-dependent hydrolases 276 866 IPR032466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00127 Vifa-Chr4 15411042 15420385 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00127 K01490 - gmx:100793831 1424.84