Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00101 ATGGATAATCTCAGGCAAAGAGTTGGGAATATTTCAATTGTAGCATTACTCTTTGTTGGATTTATTTTCATTTTATTTACAATGGGTCATTTTCTTCTTCTTCCAATCAATTACTTCAATCTCACAAGGAGTACCAATATTAATGAAGCGTATAAAGATGGTCTTGAAACAGCTTTGGGCAAAGCTTCAAAGGGAAATAACAAAACATTGATAATTGCTTTTGTAAATAAGGCTTATGTAGAACAAGATGTTAATGATGATCCCATCACCATGTTTGATCTATTTTTAAGTAGCTTTTGGCTTGGACAAGAAACCAGGTCTTTGATCGATAATCTTCTCATCGTTGCCGTTGATCGAACGGCTTACGATCGATGCATGTTTTTGAGGTTGAATTGTTTTAGATTGGAAACTGATGGAGTTGATTTTGAAGGTGAAAAACTCTACATGTCTCAAGATTTTATCATGATGATGTGGACAAGAACGTTTTTTCTTTTGCAAGTTCTAAAACGTCATTACAACTTCATTTTCACCGACAGTGATGTAATGTGGTTAAGAAATCCATTTAAAAAGTTGAGCATGAAAAGAGATGAAGACATCCAAATTAGCACAGACGAATATAATGGTGATCCTTGGTCAGAAAATAATAAAATAAATACTGGATTTTATTTTGTGAGATCGAATAATAAGACCATATCATTGTTTGAAACATGGTACAAAAACAAAGACAATTCCACCGAAAAAAAGGAGCAAGATGTGCTTCAAGACCTAATTAAAGGTGGTATATTTAAACATTTGAAACTCAAGGTTAGATTCTTGGATACCCTCTATTTTAGTGGATTTTGTCAGGATAGTAAAGATTTTAGAGTTGTAACCACTGTTCATGCTAATTGTTGTCGAAGCATCATTGCAAAGGTGACTGATTTAAAGACAACCCTTCGTGATTGGAAGCAATTTAAGAAGTTAGAGGTTAATTCTACCACAAATATTCATTGGTCAAGTCATAAGAAGTGTTTGCAATCTTGGAAATCATAA 1032 0.3324 MDNLRQRVGNISIVALLFVGFIFILFTMGHFLLLPINYFNLTRSTNINEAYKDGLETALGKASKGNNKTLIIAFVNKAYVEQDVNDDPITMFDLFLSSFWLGQETRSLIDNLLIVAVDRTAYDRCMFLRLNCFRLETDGVDFEGEKLYMSQDFIMMMWTRTFFLLQVLKRHYNFIFTDSDVMWLRNPFKKLSMKRDEDIQISTDEYNGDPWSENNKINTGFYFVRSNNKTISLFETWYKNKDNSTEKKEQDVLQDLIKGGIFKHLKLKVRFLDTLYFSGFCQDSKDFRVVTTVHANCCRSIIAKVTDLKTTLRDWKQFKKLEVNSTTNIHWSSHKKCLQSWKS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00101 343 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 142 292 IPR029044 -
Vifa4g00101 343 PANTHER EXPRESSED PROTEIN-RELATED 18 337 IPR044821 -
Vifa4g00101 343 Pfam Nucleotide-diphospho-sugar transferase 108 308 IPR005069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00101 Vifa-Chr4 12146302 12147743 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00101 - - tpra:123886932 490.73