Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00095 ATGCCTTCCAATGCGACGTTTTTCAACAATTACGGTTACGATTTCCTTCTGGGCTCGATCGCTGCGTTCTATATATTCATGGTGCCTTACACCAAGGTCGAAGAAAGTTTCAATGTTCAGGCAATGCACGATATTCTTTATCATCGCCTTCACTTAGATAACTATGATCATCTGGAGTTTCCCGGTGTGGTTCCTCGCACTTTCATAGGTGCTTTGCTTGTCTCACTTATTGCGTCTCCCATTGTGTTAATTGCAACTTTGCTGCATTTGCCAAAGTTTTATGCTCTTATCATAGTTCGAATGGTCCTAGGATGCATCGTACTGTATACACTAAGATTCTTTCGTCATCAGATAAGGAATAAATTTGGTTGCCAAGTAGAAACCTTCTTTGTGATACTAACTTCCATTCAGTTTCATTTTCTGTTCTATTGTTCTCGCCCACTTCCTAACATTCTTGCTCTGGGTATAGTGAATTTGGCATTTGGATACTGGTTCCAGGACCGCTTTTATGCCGCTATAAACTCTTTGATTTTTGCTACAACTGTGTTCAGATGTGACATGCTGTTACTTCTTGGTCCTCTTGGGCTACAACTTCTTCTGACGAAAAAAATTTCAGTATGGAGTGTTCTAAAATACTGTACTGGGATGGCTTTCTTATGCGTAGGTATAACCATATTGGCTGACTCAATTATGTGGAAAAGGTTGTTGTGGCCTGAGTTTGAAGTTTTTTGGTTTAACTCTGTCCTGAACAAGAGTTCTGAATGGGGAACACATGCTTTCCATTGGTATTTCACTTCCGCACTCCCTCGTTCACTACTTGTTGCATATCCTCTTTCACTGTTTGGTTTCTTACTAGACAGAAGAGTACGGCCTTTTGCTTTCCCTGTTCTTGCCTTCATTTTTCTTTACTCTAAGCTTCCCCACAAGGAGCTTCGTTTTATTTTAAGTTCAGTTCCAATTTTCAACTTGTCTGCTTCTATTGCATGTAACAGAATTTACAATAATAGGAAAAAGATGATCTGGAACTTGCTTTTCCTCATTATGTTGGGATTACTTCTAATGAGTCTTGCAGTAACCGTCACAACTTTTACAGCATCATATTGGAACTATCCTAGTGGTCATGCCTTAAGAAAATTGCACGGGATTGGTCTTCATCAGGATATGAATGAACAAATAGTTCACATCGATACTTTTTCTGCAATGAATGGAATATCTCGCTTTTGTGAAAGGGATTTCCCATGGAGATATTCTAAAGAAGAAGAAATTAGCTTGCAAGAATTTCAGCAGAGAAACTTTACTTTCCTAATAAATGAACATCCTGTGATCAATGGATTCAAGTGTCTATTTACTGAAGATGGTTTCTCAAGAATGCACATTAAATATGGCTTTCCACCAATCTTACTGGTTAAAGAGCCCAAAGTTTATGTCCATGGAAATTTAGAAAACCAGGTTGTTTTCAACAAAGTTTGGCCTGGCTGCCCATAG 1485 0.3879 MPSNATFFNNYGYDFLLGSIAAFYIFMVPYTKVEESFNVQAMHDILYHRLHLDNYDHLEFPGVVPRTFIGALLVSLIASPIVLIATLLHLPKFYALIIVRMVLGCIVLYTLRFFRHQIRNKFGCQVETFFVILTSIQFHFLFYCSRPLPNILALGIVNLAFGYWFQDRFYAAINSLIFATTVFRCDMLLLLGPLGLQLLLTKKISVWSVLKYCTGMAFLCVGITILADSIMWKRLLWPEFEVFWFNSVLNKSSEWGTHAFHWYFTSALPRSLLVAYPLSLFGFLLDRRVRPFAFPVLAFIFLYSKLPHKELRFILSSVPIFNLSASIACNRIYNNRKKMIWNLLFLIMLGLLLMSLAVTVTTFTASYWNYPSGHALRKLHGIGLHQDMNEQIVHIDTFSAMNGISRFCERDFPWRYSKEEEISLQEFQQRNFTFLINEHPVINGFKCLFTEDGFSRMHIKYGFPPILLVKEPKVYVHGNLENQVVFNKVWPGCP 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00095 494 Pfam Alg9-like mannosyltransferase family 30 361 IPR005599 GO:0016757
Vifa4g00095 494 PANTHER GLYCOSYLTRANSFERASE 13 465 IPR005599 GO:0016757
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00095 219 320 Glycosyltransferase AT5G14850 32.353 1.15e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00095 K03847 - gmx:100776070 846.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00095 4 11758027 11765866 Vifa4g00095 4 11758027 11765866 ECH