Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00081 ATGGCTAATAACTTTTTCCTTTTATTTGTATTTGTTTTTGCTAGTCAAGTGATTGGCGGATTGAATACAAAGCTACCACCTCCTTCCTATGGAAATACAGTAAGCATTCTTAGTATTGATGGAGGTGGGATTAAGGGAATTCTTCCAACTGTTATTCTTGAGTACTTGGAAAATGCTCTTCAGAGTGTGTCAAGAGATGAAAAGGCAGCACTAGCAGACTATTTTGATGTGATAGCAGGAACAAGTACAGGAGGAATCATTACTGGATTGCTAACTACTCCTAACCCTAATGACACTTCACGTCCTTTATTTACTACTAAACAAATCTTACAATTCTACTTGGAATTTGGTCCTTCTATATTCAACCAAACTGATGCTATTGGTTGGGATAATGATACTCCACATGCCAAGTTTGACGGCAAGTTCTTACTGTTAAGAAACAAGATACATATATGGAATAAGGTTTGA 468 0.3654 MANNFFLLFVFVFASQVIGGLNTKLPPPSYGNTVSILSIDGGGIKGILPTVILEYLENALQSVSRDEKAALADYFDVIAGTSTGGIITGLLTTPNPNDTSRPLFTTKQILQFYLEFGPSIFNQTDAIGWDNDTPHAKFDGKFLLLRNKIHIWNKV 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00081 155 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 37 155 IPR002641 GO:0006629
Vifa4g00081 155 SUPERFAMILY FabD/lysophospholipase-like 34 143 IPR016035 -
Vifa4g00081 155 PANTHER XYLOSE ISOMERASE 23 143 - -
Vifa4g00081 155 Pfam Patatin-like phospholipase 37 104 IPR002641 GO:0006629
Vifa4g00081 155 Gene3D Cytosolic phospholipase A2 catalytic domain 27 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00081 Vifa-Chr4 9435012 9435668 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00081 25 143 Miscellaneous Gene Families AT2G26560 53.226 3.30e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00081 - - cam:101513147 197.208